RNA–Protein interactions for RNA: ENST00000348286.6

DNMT3B-203, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,048 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-203ENST00000348286 NME3Q13232 169 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 AMHR2Q16671 573 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 ACTL9Q8TC94 416 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 SHC3Q92529 594 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 VPS11Q9H270 941 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 SMARCAD1Q9H4L7 1026 aa13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 KLHL8Q9P2G9 620 aaPredicted RBP13.79□□□□□ -0.2
DNMT3B-203ENST00000348286 TCRBV7S2A1N4TA0A589 114 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 PIAS1O75925 651 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 KRT38O76015 456 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 GLRA4Q5JXX5 417 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 HEATR6Q6AI08 1181 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 LVRNQ6Q4G3 990 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 SIAH1Q8IUQ4 282 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 SLC9A9Q8IVB4 645 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 AGAP3Q96P47 875 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 NAALADL1Q9UQQ1 740 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 GCKP35557 465 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 SCTRP47872 440 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 CTCFP49711 727 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 OTUD4Q01804 1114 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 TMEM132DQ14C87 1099 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 TAF12Q16514 161 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 FBXO16Q8IX29 292 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 GPATCH2LQ9NWQ4 482 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 SAE1Q9UBE0 346 aaPredicted RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 COG5Q9UP83 839 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 PCDHA2Q9Y5H9 948 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 F8VP50 259 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 HAUS5O94927 633 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 CCNE2O96020 404 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 KRT4P19013 534 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 DSG3P32926 999 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 GCNT1Q02742 428 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 RNASELQ05823 741 aaKnown RBP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 SPIRE1Q08AE8 756 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 LRRC57Q8N9N7 239 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 CHST13Q8NET6 341 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 HPDLQ96IR7 371 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 CGRRF1Q99675 332 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 DCLK3Q9C098 648 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 UBN1Q9NPG3 1134 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 WHRNQ9P202 907 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 MYH8P13535 1937 aa13.78□□□□□ -0.2
DNMT3B-203ENST00000348286 CCDC78A2IDD5 438 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 PEX10O60683 326 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 HUS1O60921 280 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 ZC3H11AO75152 810 aaKnown RBP eCLIP13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 SERPINB6P35237 376 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 AP1B1Q10567 949 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 DRP2Q13474 957 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 MDH1BQ5I0G3 518 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 NIPA1Q7RTP0 329 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 SGSM3Q96HU1 749 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 NACA2Q9H009 215 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 AP5M1Q9H0R1 490 aa13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 MAP3K20Q9NYL2 800 aaKnown RBP13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 ZNF142P52746 1687 aaPredicted RBP13.77□□□□□ -0.2
DNMT3B-203ENST00000348286 PDE4DIPQ5VU43 2346 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 DCDC2CA8MYV0 355 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 IGF2BP3O00425 579 aaKnown RBP eCLIP13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 CXCL8P10145 99 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 GARSP41250 739 aaKnown RBP13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 CYB5D1Q6P9G0 228 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 CRLF3Q8IUI8 442 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 NUDCD3Q8IVD9 361 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 TRIM42Q8IWZ5 723 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 BEST2Q8NFU1 509 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 PSMC3IPQ9P2W1 217 aaPredicted RBP13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 DNPEPQ9ULA0 475 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 BTNL10A8MVZ5 291 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 RBP5P82980 135 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 CCNG2Q16589 344 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 DUPD1Q68J44 220 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 DSTYKQ6XUX3 929 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 CPNE8Q86YQ8 564 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 MREGQ8N565 214 aa13.77□□□□□ -0.21
DNMT3B-203ENST00000348286 E2F8A0AVK6 867 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 DCAF8L1A6NGE4 600 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 UBOX5O94941 541 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 RPS12P25398 132 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 TNFRSF8P28908 595 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 GCLCP48506 637 aaPredicted RBP13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 RWDD4Q6NW29 188 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 ARMCX2Q7L311 632 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 AGR3Q8TD06 166 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 P2RX7Q99572 595 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 SIX2Q9NPC8 291 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 RNF19AQ9NV58 838 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 WDR35Q9P2L0 1181 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 ZC3H7BQ9UGR2 993 aaKnown RBP13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 INPP5FQ9Y2H2 1132 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 LRP6O75581 1613 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 PLIN4Q96Q06 1357 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 TRAPPC3O43617 180 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 OR5B17Q8NGF7 314 aa13.76□□□□□ -0.21
DNMT3B-203ENST00000348286 PHRF1Q9P1Y6 1649 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms