RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 FKBP1CQ5VVH2 108 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 TAS2R42Q7RTR8 314 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 TPCN2Q8NHX9 752 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 CPA5Q8WXQ8 436 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 PRMT6Q96LA8 375 aaPredicted RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 PITPNM3Q9BZ71 974 aa11.43□□□□□ -0.58
CLCN6-202ENST00000346436 REXO2Q9Y3B8 237 aaKnown RBP11.43□□□□□ -0.58
CLCN6-202ENST00000346436 ZMYM2Q9UBW7 1377 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 LTN1O94822 1766 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 XRN1Q8IZH2 1706 aaKnown RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 GNRH1P01148 92 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 BRAFP15056 766 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 FKBP1AP62942 108 aaKnown RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 MTA1Q13330 715 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 C2CD6Q53TS8 623 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CCDC149Q6ZUS6 474 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 ATP6V0D2Q8N8Y2 350 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 STK33Q9BYT3 514 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 MAN1C1Q9NR34 630 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 BLOC1S4Q9NUP1 217 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 RWDD3Q9Y3V2 267 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 FARP2O94887 1054 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CTXN3Q4LDR2 81 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 SPOPLQ6IQ16 392 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CNPY4Q8N129 248 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 DCLK2Q8N568 766 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CYFIP2Q96F07 1278 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 VCX3BQ9H321 246 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 UXTQ9UBK9 157 aaPredicted RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 KLRC4O43908 158 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PARNO95453 639 aaKnown RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CHRNA3P32297 505 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 RASSF2P50749 326 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 OXCT1P55809 520 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PTGISQ16647 500 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 IQSEC1Q6DN90 963 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PCGF5Q86SE9 256 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 CREG2Q8IUH2 290 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 MXRA8Q9BRK3 442 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 ISCUQ9H1K1 167 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PLA2G4CQ9UP65 541 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 POLRMTO00411 1230 aaKnown RBP11.42□□□□□ -0.58
CLCN6-202ENST00000346436 ADAMTS3O15072 1205 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 MSH4O15457 936 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PSMD3O43242 534 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 AKT1P31749 480 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PPM1AP35813 382 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 PRAMEP78395 509 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 EDRF1Q3B7T1 1238 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 MMEL1Q495T6 779 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 C10orf120Q5SQS8 335 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 TLR10Q9BXR5 811 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 TEX12Q9BXU0 123 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 NDFIP2Q9NV92 336 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 BCL9O00512 1426 aa11.42□□□□□ -0.58
CLCN6-202ENST00000346436 TJP3O95049 919 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 NPTXRO95502 500 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 KRT7P08729 469 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CKBP12277 381 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PPP4CP60510 307 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PSMC1P62191 440 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PLA2G4FQ68DD2 849 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 IL31Q6EBC2 164 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 DSG4Q86SJ6 1040 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 JAMLQ86YT9 394 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CYP2W1Q8TAV3 490 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CFAP36Q96G28 342 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 ANKEF1Q9NU02 776 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 DIS3Q9Y2L1 958 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 NRXN3Q9Y4C0 1643 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 NFAT5O94916 1531 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 LRRC10BA6NIK2 292 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TCP11X1B4DZS4 312 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PPP1R12AO14974 1030 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 NDUFS2O75306 463 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 AKAP3O75969 853 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 COMTP21964 271 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 CTNNB1P35222 781 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 OAZ1P54368 228 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 POLD3Q15054 466 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PARP9Q8IXQ6 854 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 SEC16BQ96JE7 1060 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 APBA2Q99767 749 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PI4K2AQ9BTU6 479 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 KIFC3Q9BVG8 833 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HSPBP1Q9NZL4 362 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 PPP1R9AQ9ULJ8 1098 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 ALG6Q9Y672 507 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TTC4O95801 387 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HIST1H2AGP0C0S8 130 aaPredicted RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HIST1H2ADP20671 130 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 MSH2P43246 934 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 ERFP50548 548 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 AP1B1Q10567 949 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TLK2Q86UE8 772 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HIST1H2AHQ96KK5 128 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 TGS1Q96RS0 853 aaKnown RBP11.41□□□□□ -0.58
CLCN6-202ENST00000346436 HIST1H2AJQ99878 128 aa11.41□□□□□ -0.58
CLCN6-202ENST00000346436 H2AFJQ9BTM1 129 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 75.8 ms