RNA–Protein interactions for RNA: ENST00000344921.10

SMARCB1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2 BASIC

Gene SMARCB1, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-202ENST00000344921 OR6C75A6NL08 312 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 P4HA1P13674 534 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 CBWD6Q4V339 395 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 CBWD3Q5JTY5 395 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 CBWD5Q5RIA9 395 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 ANKRD54Q6NXT1 300 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 TRIM59Q8IWR1 403 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 KREMEN2Q8NCW0 462 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 APOL5Q9BWW9 433 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 NAT10Q9H0A0 1025 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 VRTNQ9H8Y1 702 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 DZANK1Q9NVP4 752 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 DDX43Q9NXZ2 648 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 POLIQ9UNA4 740 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 SPTBN5Q9NRC6 3674 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 TSC2P49815 1807 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 OR4Q2P0C623 313 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 MTIF2P46199 727 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 LHX1P48742 406 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 MYL7Q01449 175 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 ANO6Q4KMQ2 910 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 SPOPLQ6IQ16 392 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 ZNF461Q8TAF7 563 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 ENOX1Q8TC92 643 aaKnown RBP22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 PLEKHA4Q9H4M7 779 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 RAB20Q9NX57 234 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 NFE2L3Q9Y4A8 694 aa22.31■■□□□ 1.16
SMARCB1-202ENST00000344921 WDR27A2RRH5 827 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 N4BP1O75113 896 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 ASS1P00966 412 aaKnown RBP22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 HOXB8P17481 243 aaPredicted RBP22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 ELF1P32519 619 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 FMO5P49326 533 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 CETN1Q12798 172 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 KCNH2Q12809 1159 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 AAK1Q2M2I8 961 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 WDR44Q5JSH3 913 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 LIN9Q5TKA1 542 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 LILRA6Q6PI73 481 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 SCARA5Q6ZMJ2 495 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 CD207Q9UJ71 328 aa22.3■■□□□ 1.16
SMARCB1-202ENST00000344921 C1RP00736 705 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 NOP14P78316 857 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 TSPY1Q01534 308 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 IRF2BP1Q8IU81 584 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 C12orf76Q8N812 135 aaPredicted RBP22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 OR6B3Q8NGW1 331 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 OR10T2Q8NGX3 314 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 SPATA18Q8TC71 538 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 TMEM209Q96SK2 561 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 SNX25Q9H3E2 840 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 SAMSN1Q9NSI8 373 aaKnown RBP22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 BRWD1Q9NSI6 2320 aa22.29■■□□□ 1.16
SMARCB1-202ENST00000344921 SLC34A2O95436 690 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 AFPP02771 609 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 TPGS2Q68CL5 300 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 SEMA4DQ92854 862 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 MSLNLQ96KJ4 702 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 PGLYRP2Q96PD5 576 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 RTP3Q9BQQ7 232 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 MRPL45Q9BRJ2 306 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 FBXW11Q9UKB1 542 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 PRRG1O14668 218 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 LRRN2O75325 713 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 ABLIM3O94929 683 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 ATF2P15336 505 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 ACAT1P24752 427 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 PCSK1P29120 753 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 GNL1P36915 607 aaPredicted RBP22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 ADCY1Q08828 1119 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 SLC39A12Q504Y0 691 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 RARS2Q5T160 578 aaKnown RBP22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 RNF19BQ6ZMZ0 732 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 OSTM1Q86WC4 334 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 HDAC7Q8WUI4 952 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 KBTBD7Q8WVZ9 684 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 ACBD6Q9BR61 282 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 SMYD3Q9H7B4 428 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 SFXN1Q9H9B4 322 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 CYP4F11Q9HBI6 524 aa22.28■■□□□ 1.16
SMARCB1-202ENST00000344921 MTCL1Q9Y4B5 1905 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 GABRDO14764 452 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 TACC1O75410 805 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 PDGFRBP09619 1106 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 PRKCSHP14314 528 aaPredicted RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 WARSP23381 471 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 RAP1GAPP47736 663 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 CDR1P51861 262 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 CDH8P55286 799 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 MRPS5P82675 430 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 MYL5Q02045 173 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 GPR17Q13304 367 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 ZSCAN23Q3MJ62 389 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 LEXMQ3ZCV2 418 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 CES5AQ6NT32 575 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 SYCE2Q6PIF2 218 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 TMC5Q6UXY8 1006 aa22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 DCP1BQ8IZD4 617 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 ATXN2LQ8WWM7 1075 aaKnown RBP22.27■■□□□ 1.16
SMARCB1-202ENST00000344921 ZCWPW1Q9H0M4 648 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms