RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 SLC7A14Q8TBB6 771 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 DOLKQ9UPQ8 538 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ADGRG1Q9Y653 693 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 EEF2KO00418 725 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 XYLBO75191 536 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 NCAM1P13591 858 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 PTGER2P43116 358 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ZPBP2Q6X784 338 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 SYN2Q92777 582 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 RMDN1Q96DB5 314 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM208AQ9UK61 1670 aaKnown RBP17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ZMYM2Q9UBW7 1377 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 GJB1P08034 283 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 GPD1P21695 349 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 SCNN1GP51170 649 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 FBXO47Q5MNV8 452 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 PID1Q7Z2X4 250 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 NT5DC4Q86YG4 428 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 SPDYE1Q8NFV5 336 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 N4BP2L2Q92802 583 aaPredicted RBP17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 FTHL17Q9BXU8 183 aa17.24■□□□□ 0.35
SMARCA4-201ENST00000344626 ACKR2O00590 384 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 ZBTB39O15060 712 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 PLD1Q13393 1074 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 PPIGQ13427 754 aaKnown RBP eCLIP17.23■□□□□ 0.351e-6■■■□□ 15.5
SMARCA4-201ENST00000344626 ATPAF2Q8N5M1 289 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 MCEEQ96PE7 176 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 SAYSD1Q9NPB0 183 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 PTCH2Q9Y6C5 1203 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 EML1O00423 815 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 CCL5P13501 91 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 SLC11A2P49281 568 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 STX1BP61266 288 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 TLE2Q04725 743 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 E2F5Q15329 346 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 ITIH5Q86UX2 942 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 DCLK2Q8N568 766 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 ATXN3LQ9H3M9 355 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 MRPL17Q9NRX2 175 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 RNF186Q9NXI6 227 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 NR1I3Q14994 352 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 PCBP1Q15365 356 aaKnown RBP eCLIP17.23■□□□□ 0.353e-16■■■□□ 16
SMARCA4-201ENST00000344626 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 MEIS2O14770 477 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 UCMAQ8WVF2 138 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 HES2Q9Y543 173 aa17.23■□□□□ 0.35
SMARCA4-201ENST00000344626 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 ASMTLO95671 621 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 AMPD2Q01433 879 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 LAMB3Q13751 1172 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 ASB7Q9H672 318 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 ST3GAL5Q9UNP4 418 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 UBIAD1Q9Y5Z9 338 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 F5H423 210 aaPredicted RBP17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 RASGRF2O14827 1237 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 KRT38O76015 456 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 CHEK2O96017 543 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 HSPA1AP0DMV8 641 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 HSPA1BP0DMV9 641 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 IFNAR2P48551 515 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 PRAMEP78395 509 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 CYP24A1Q07973 514 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 FRA10AC1Q70Z53 315 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 ENGASEQ8NFI3 743 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 ALKBH8Q96BT7 664 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 GALCP54803 685 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 NAB2Q15742 525 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 CEP120Q8N960 986 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 MAP3K13O43283 966 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 CDH18Q13634 790 aa17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 PABPC5Q96DU9 382 aaKnown RBP17.22■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM187AA6NFU0 413 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 SPTLC1O15269 473 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 BRD2P25440 801 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 CASP4P49662 377 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ZNF211Q13398 564 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 EPC2Q52LR7 807 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 LLGL2Q6P1M3 1020 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 KIAA0319LQ8IZA0 1049 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM71BQ8TC56 605 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ERGIC2Q96RQ1 377 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 INTS9Q9NV88 658 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM47DPA6NHR8 397 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 RECQL4O94761 1208 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ITGB5P18084 799 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 MLH1P40692 756 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 EIF3EP60228 445 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 SFSWAPQ12872 951 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 PLPPR4Q7Z2D5 763 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 SLC35G2Q8TBE7 412 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 HELQQ8TDG4 1101 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 OSBPL9Q96SU4 736 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 SMPD4Q9NXE4 827 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 SELPP16109 830 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 NOL9Q5SY16 702 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 ARHGEF2Q92974 986 aaKnown RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 FAM161BQ96MY7 647 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 RRAGDQ9NQL2 400 aaPredicted RBP17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 LOC102724159A0A0B4J2E5 919 aa17.21■□□□□ 0.35
SMARCA4-201ENST00000344626 FBXO21O94952 628 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms