RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 BICD1Q96G01 975 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 YIPF2Q9BWQ6 316 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 GPCPD1Q9NPB8 672 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 SETD4Q9NVD3 440 aa7.88□□□□□ -1.15
ZNF540-202ENST00000343599 ALDH2P05091 517 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CEACAM1P13688 526 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ATP4AP20648 1035 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 KLRC1P26715 233 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CD52P31358 61 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 RANBP1P43487 201 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ANTXR2P58335 489 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 EVX2Q03828 476 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 IFFO1Q0D2I5 559 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ITGB3BPQ13352 177 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 SLMAPQ14BN4 828 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ACBD5Q5T8D3 534 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 PIP4P1Q86T03 277 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CEP57Q86XR8 500 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CLEC10AQ8IUN9 316 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC13Q8IYE1 715 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC170Q8IYT3 715 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 MYOCDQ8IZQ8 938 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ALG1Q9BT22 464 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 NRDE2Q9H7Z3 1164 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 EBF2Q9HAK2 575 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 SIT1Q9Y3P8 196 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 BIN1O00499 593 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CUTAO60888 179 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 EIF2AK2P19525 551 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CDR1P51861 262 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 USP4Q13107 963 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TUBB2AQ13885 445 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ST3GAL2Q16842 350 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ANO1Q5XXA6 986 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 SYNE3Q6ZMZ3 975 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 MICALCLQ6ZW33 695 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CYFIP1Q7L576 1253 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 RALYLQ86SE5 291 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 SCUBE3Q8IX30 993 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 THNSL1Q8IYQ7 743 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TRIM58Q8NG06 486 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 IL31RAQ8NI17 732 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ACDQ96AP0 544 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 RBM41Q96IZ5 413 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TBATAQ96M53 351 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ADAM2Q99965 735 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TUBB2BQ9BVA1 445 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 MGEA5O60502 916 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 RNF8O76064 485 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TUBP50607 506 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ERVFC1P60507 584 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 KRT85P78386 507 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 DEUP1Q05D60 604 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 ZNF211Q13398 564 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 WDR93Q6P2C0 686 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CYB5D1Q6P9G0 228 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 DDX42Q86XP3 938 aaKnown RBP eCLIP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 C17orf50Q8WW18 174 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 DNAJB3Q8WWF6 145 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC47Q96A33 483 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 WDR24Q96S15 920 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 PIGSQ96S52 555 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 LSM14BQ9BX40 385 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 LSG1Q9H089 658 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 MMADHCQ9H3L0 296 aaPredicted RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TBC1D17Q9HA65 648 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 RSAD1Q9HA92 442 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 USP29Q9HBJ7 922 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 INCENPQ9NQS7 918 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TYW1Q9NV66 732 aaKnown RBP7.87□□□□□ -1.15
ZNF540-202ENST00000343599 TBC1D13Q9NVG8 400 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 CNTN3Q9P232 1028 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 NDUFB9Q9Y6M9 179 aa7.87□□□□□ -1.15
ZNF540-202ENST00000343599 DOCK8Q8NF50 2099 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 MGRN1O60291 552 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 OAZ2O95190 189 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 PSMA5P28066 241 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 GRM5P41594 1212 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 DBN1Q16643 649 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 PLEKHG6Q3KR16 790 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 CCDC181Q5TID7 509 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 SNX30Q5VWJ9 437 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 CNNM4Q6P4Q7 775 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 SLC27A1Q6PCB7 646 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 MFSD6LQ8IWD5 586 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 FAM76AQ8TAV0 307 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 SH3GL2Q99962 352 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 CAPS2Q9BXY5 557 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 TRIM7Q9C029 511 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 KCNK12Q9HB15 430 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 A6NHS1 94 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 TBKBP1A7MCY6 615 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 GFRA2O00451 464 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 MCF2P10911 925 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 DRD1P21728 446 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 FSHRP23945 695 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 NAMPTP43490 491 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 LMAN2Q12907 356 aa7.86□□□□□ -1.15
ZNF540-202ENST00000343599 RRP12Q5JTH9 1297 aaKnown RBP7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms