RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CD19P15391 556 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 MMP8P22894 467 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 ECHS1P30084 290 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 PTP4A2Q12974 167 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 HIC1Q14526 733 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 TMEM35BQ8NCS4 154 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 CXorf38Q8TB03 319 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 ARL8AQ96BM9 186 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 BCO2Q9BYV7 579 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 SCINQ9Y6U3 715 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 HSPA8P11142 646 aaKnown RBP19.75■□□□□ 0.75
HOXA9-201ENST00000343483 HOXA11P31270 313 aaPredicted RBP19.75■□□□□ 0.75
HOXA9-201ENST00000343483 HSPA9P38646 679 aaKnown RBP19.75■□□□□ 0.75
HOXA9-201ENST00000343483 GRM5P41594 1212 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 CDC42EP1Q00587 391 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 ORC1Q13415 861 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 DCAF4L1Q3SXM0 396 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 TTMPQ5BVD1 217 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 DNAJB3Q8WWF6 145 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 PIK3R5Q8WYR1 880 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 KIF12Q96FN5 646 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 HPDLQ96IR7 371 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 PKNOX2Q96KN3 472 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 SDCBP2Q9H190 292 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 PARVAQ9NVD7 372 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 AGAP1Q9UPQ3 857 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 C2CD2Q9Y426 696 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 CEP83Q9Y592 693 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 ANK1P16157 1881 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 DOCK3Q8IZD9 2030 aa19.75■□□□□ 0.75
HOXA9-201ENST00000343483 RPS6KA5O75582 802 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 GJB6O95452 261 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 ATICP31939 592 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 SLC1A1P43005 524 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 DAB2IPQ5VWQ8 1189 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 PLEKHA7Q6IQ23 1121 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 DPP3Q9NY33 737 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 TLR3O15455 904 aaKnown RBP19.74■□□□□ 0.75
HOXA9-201ENST00000343483 PROSCO94903 275 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 KRT14P02533 472 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 ZNF200P98182 395 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-201ENST00000343483 DR1Q01658 176 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 PPP2R5EQ16537 467 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 SLC27A1Q6PCB7 646 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 APBB1IPQ7Z5R6 666 aaPredicted RBP19.74■□□□□ 0.75
HOXA9-201ENST00000343483 EIF2AQ9BY44 585 aaKnown RBP19.74■□□□□ 0.75
HOXA9-201ENST00000343483 ITGA11Q9UKX5 1188 aa19.74■□□□□ 0.75
HOXA9-201ENST00000343483 BRCA2P51587 3418 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 TREHO43280 583 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 CALB1P05937 261 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 P4HA1P13674 534 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 DARSP14868 501 aaKnown RBP19.73■□□□□ 0.75
HOXA9-201ENST00000343483 LLGL1Q15334 1064 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 FSCN1Q16658 493 aaKnown RBP19.73■□□□□ 0.75
HOXA9-201ENST00000343483 NOTUMQ6P988 496 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 PLVAPQ9BX97 442 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 SNTG2Q9NY99 539 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 CWC15Q9P013 229 aaKnown RBP19.73■□□□□ 0.75
HOXA9-201ENST00000343483 HMGXB4Q9UGU5 601 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 PCDHGC3Q9UN70 934 aa19.73■□□□□ 0.75
HOXA9-201ENST00000343483 UTP11Q9Y3A2 253 aaKnown RBP19.73■□□□□ 0.75
HOXA9-201ENST00000343483 TCRBV7S2A1N4TA0A589 114 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 HAS3O00219 553 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 DAPK3O43293 454 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 IVLP07476 585 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 CTGFP29279 349 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 RAD23BP54727 409 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 RBP5P82980 135 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 LRRC31Q6UY01 552 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 SLC13A5Q86YT5 568 aaPredicted RBP19.72■□□□□ 0.75
HOXA9-201ENST00000343483 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.72■□□□□ 0.75
HOXA9-201ENST00000343483 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 TRIM51Q9BSJ1 452 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 ZNF518BQ9C0D4 1074 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 NEUROG2Q9H2A3 272 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.72■□□□□ 0.75
HOXA9-201ENST00000343483 HES2Q9Y543 173 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 KAT6AQ92794 2004 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 MED7O43513 233 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 PHF2O75151 1096 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 EIF4BP23588 611 aaKnown RBP19.72■□□□□ 0.75
HOXA9-201ENST00000343483 DENND1BQ6P3S1 775 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 CD302Q8IX05 232 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 WDTC1Q8N5D0 677 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 PRELID2Q8N945 189 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 FEZF2Q8TBJ5 459 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 LRRC45Q96CN5 670 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 FAXDC2Q96IV6 333 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 TWNKQ96RR1 684 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 KATNAL1Q9BW62 490 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 TRIM6Q9C030 488 aaPredicted RBP19.72■□□□□ 0.75
HOXA9-201ENST00000343483 CXCL16Q9H2A7 254 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 VRTNQ9H8Y1 702 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 MTUS1Q9ULD2 1270 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 USTQ9Y2C2 406 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 Q9Y3F1 56 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 MGAMO43451 1857 aa19.72■□□□□ 0.75
HOXA9-201ENST00000343483 PAEPP09466 180 aa19.71■□□□□ 0.75
HOXA9-201ENST00000343483 SSR1P43307 286 aaKnown RBP19.71■□□□□ 0.75
HOXA9-201ENST00000343483 RPL7AP62424 266 aaKnown RBP19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms