RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.4■□□□□ 0.06
TDP2-201ENST00000341060 DNPEPQ9ULA0 475 aa15.4■□□□□ 0.06
TDP2-201ENST00000341060 SBF1O95248 1867 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 TCP11X1B4DZS4 312 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 PI4K2BG5E9Z4 385 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 DNALI1O14645 258 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 DDNO94850 711 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 KRT1P04264 644 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 KRT10P13645 584 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 ATF7P17544 494 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 PTPN7P35236 360 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 STAT5BP51692 787 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 GPR162Q16538 588 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 EAPPQ56P03 285 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 C9orf131Q5VYM1 1079 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 DNAJC24Q6P3W2 148 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 MFSD7Q6UXD7 560 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 PRUNE1Q86TP1 453 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 GPC2Q8N158 579 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 RIBC1Q8N443 379 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 ZNF518BQ9C0D4 1074 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 NIF3L1Q9GZT8 377 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 KCNK9Q9NPC2 374 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 NAALADL1Q9UQQ1 740 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 USP15Q9Y4E8 981 aaPredicted RBP15.39■□□□□ 0.05
TDP2-201ENST00000341060 IVNS1ABPQ9Y6Y0 642 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 OTOFQ9HC10 1997 aa15.39■□□□□ 0.05
TDP2-201ENST00000341060 FOXO6A8MYZ6 492 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 GH1P01241 217 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 EDNRBP24530 442 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 CDH5P33151 784 aaPredicted RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 NF2P35240 595 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 MAGEA4P43358 317 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 TAP1Q03518 808 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 MPP2Q14168 576 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 SH3D19Q5HYK7 790 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 PPP1R15BQ5SWA1 713 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 FAM160B1Q5W0V3 765 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 KAZNQ674X7 775 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 CDCA2Q69YH5 1023 aaPredicted RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 ALLCQ8N6M5 410 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 ANKRD42Q8N9B4 389 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 GLIS1Q8NBF1 620 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 TMEM35BQ8NCS4 154 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 PRPF31Q8WWY3 499 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 MRPL4Q9BYD3 311 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 CISHQ9NSE2 258 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 TBK1Q9UHD2 729 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 EVPLQ92817 2033 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 PAPPA2Q9BXP8 1791 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 F8VP50 259 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 EIF4BP23588 611 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 BRD2P25440 801 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 MYL6P60660 151 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 OGDHQ02218 1023 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 MKRN3Q13064 507 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 PIGHQ14442 188 aaPredicted RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 NEDD9Q14511 834 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 SGSM1Q2NKQ1 1148 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 TFDP3Q5H9I0 405 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 TMEM63BQ5T3F8 832 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 ZFYVE27Q5T4F4 411 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 NUGGCQ68CJ6 796 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 DCUN1D2Q6PH85 259 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 SPOCD1Q6ZMY3 1216 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 ARHGEF18Q6ZSZ5 1173 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 PARP9Q8IXQ6 854 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 SRRM1Q8IYB3 904 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 NIPA2Q8N8Q9 360 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 CFAP57Q96MR6 1250 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 GPRC5DQ9NZD1 345 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 PCDHGC3Q9UN70 934 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 ZNF148Q9UQR1 794 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 DRG1Q9Y295 367 aaKnown RBP15.38■□□□□ 0.05
TDP2-201ENST00000341060 PPME1Q9Y570 386 aa15.38■□□□□ 0.05
TDP2-201ENST00000341060 hCG_1818297A0A087WSY0 165 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 CHUKO15111 745 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 OGTO15294 1046 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 TCF7P36402 384 aaPredicted RBP15.37■□□□□ 0.05
TDP2-201ENST00000341060 SF3A3Q12874 501 aaKnown RBP eCLIP15.37■□□□□ 0.059e-15■■■■■ 32.6
TDP2-201ENST00000341060 OASLQ15646 514 aaKnown RBP15.37■□□□□ 0.05
TDP2-201ENST00000341060 LBX2Q6XYB7 198 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 ZBTB33Q86T24 672 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 TRPM4Q8TD43 1214 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 TTC25Q96NG3 672 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 ACO2Q99798 780 aaKnown RBP15.37■□□□□ 0.05
TDP2-201ENST00000341060 TCHPQ9BT92 498 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 ABCF3Q9NUQ8 709 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 DDX56Q9NY93 547 aaKnown RBP15.37■□□□□ 0.05
TDP2-201ENST00000341060 MCM3APO60318 1980 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 DICER1Q9UPY3 1922 aaKnown RBP15.37■□□□□ 0.05
TDP2-201ENST00000341060 ABLIM1O14639 778 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 SUN1O94901 812 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 ARSEP51690 589 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 MORF4L2Q15014 288 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 SURF1Q15526 300 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 DUOXA2Q1HG44 320 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 SMYD5Q6GMV2 418 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 CYP4F22Q6NT55 531 aa15.37■□□□□ 0.05
TDP2-201ENST00000341060 GPAT2Q6NUI2 795 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms