RNA–Protein interactions for RNA: ENST00000339717.11

BRPF3-201, Transcript of bromodomain and PHD finger containing 3, humanhuman

TSL 5 BASIC

Gene BRPF3, Length 4,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF3-201ENST00000339717 HMBOX1Q6NT76 420 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SYCE2Q6PIF2 218 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SHC4Q6S5L8 630 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 BNC2Q6ZN30 1099 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ANKS1AQ92625 1134 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 PHF21AQ96BD5 680 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 DNAJB4Q9UDY4 337 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 MYO1DO94832 1006 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 S100A6P06703 90 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 MYL2P10916 166 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ENO3P13929 434 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 RPA1P27694 616 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 TCF7P36402 384 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 VAC14Q08AM6 782 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 TOP3AQ13472 1001 aaPredicted RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 DEPDC1Q5TB30 811 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 SLC9A4Q6AI14 798 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 DUS1LQ6P1R4 473 aaKnown RBP13.19□□□□□ -0.3
BRPF3-201ENST00000339717 CCDC81Q6ZN84 652 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 IFNL1Q8IU54 200 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 ASZ1Q8WWH4 475 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 RFFLQ8WZ73 363 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 AGBL1Q96MI9 1066 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 PCDHGA10Q9Y5H3 936 aa13.19□□□□□ -0.3
BRPF3-201ENST00000339717 NADKO95544 446 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-201ENST00000339717 THRAP10827 490 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 IL4RP24394 825 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ATP6V1E1P36543 226 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 BFSP2Q13515 415 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KSR2Q6VAB6 950 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 TBC1D14Q9P2M4 693 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CLEC11AQ9Y240 323 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 SAMD9Q5K651 1589 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ZFYVE9O95405 1425 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF806P0C7X5 589 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KRT17Q04695 432 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 FAM26FQ5R3K3 315 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 FAM83BQ5T0W9 1011 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 IZUMO3Q5VZ72 239 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 TRIM69Q86WT6 500 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CREG2Q8IUH2 290 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ZBED8Q8IZ13 594 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 REXO1Q8N1G1 1221 aaKnown RBP13.18□□□□□ -0.3
BRPF3-201ENST00000339717 XAGE2Q96GT9 111 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KRT84Q9NSB2 600 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ATP8A2Q9NTI2 1148 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 GMIPQ9P107 970 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 PLCL2Q9UPR0 1127 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 AP4B1Q9Y6B7 739 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 FCHO1O14526 889 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 RHBDL3P58872 404 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CDK16Q00536 496 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 TRAP1Q12931 704 aaKnown RBP13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ACVR2BQ13705 512 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 NEDD8Q15843 81 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 MPRIPQ6WCQ1 1025 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KBTBD2Q8IY47 623 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 RTKN2Q8IZC4 609 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CLEC4FQ8N1N0 589 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 IRGQQ8WZA9 623 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ASPSCR1Q9BZE9 553 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 TMEM245Q9H330 911 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CHMP1AQ9HD42 196 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-201ENST00000339717 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CCDC195A0A1B0GUA6 201 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 AIM2O14862 343 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 MMP1P03956 469 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 F8A1P23610 371 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 RELAQ04206 551 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 CTC1Q2NKJ3 1217 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 KCNK18Q7Z418 384 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 ZNF285Q96NJ3 590 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 OSBPL11Q9BXB4 747 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 MLXQ9UH92 298 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 SORCS3Q9UPU3 1222 aa13.18□□□□□ -0.3
BRPF3-201ENST00000339717 SEC24AO95486 1093 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 PABPC4LP0CB38 370 aaKnown RBP13.17□□□□□ -0.3
BRPF3-201ENST00000339717 PABPC1P11940 636 aaKnown RBP13.17□□□□□ -0.3
BRPF3-201ENST00000339717 MMP13P45452 471 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 PRPSAP1Q14558 356 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 ARHGAP27Q6ZUM4 889 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 ANKRD13BQ86YJ7 626 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 CCDC33Q8N5R6 958 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 E2F7Q96AV8 911 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 PACSIN1Q9BY11 444 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 TMEM5Q9Y2B1 443 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 SIK3Q9Y2K2 1263 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 CAMTA2O94983 1202 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 CYP21A2P08686 494 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 HERVK_113P62684 666 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 TRAF3Q13114 568 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 MSLNQ13421 630 aaPredicted RBP13.17□□□□□ -0.3
BRPF3-201ENST00000339717 ALFQ53S48 1182 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 COBLL1Q53SF7 1204 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 GARNL3Q5VVW2 1013 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 FAM122CQ6P4D5 195 aa13.17□□□□□ -0.3
BRPF3-201ENST00000339717 RIPOR1Q6ZS17 1223 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms