RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 IBSPP21815 317 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CTNNA1P35221 906 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 GGCXP38435 758 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PPARDQ03181 441 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SURF1Q15526 300 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC142Q17RM4 750 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PTPN20Q4JDL3 420 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF618Q5T7W0 954 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC70Q6NSX1 233 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF410Q86VK4 478 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SESTD1Q86VW0 696 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ATG4AQ8WYN0 398 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CCDC102AQ96A19 550 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 MCEEQ96PE7 176 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CPXM1Q96SM3 734 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ADPGKQ9BRR6 497 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 BCO2Q9BYV7 579 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 GCOM2Q9BZD3 368 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 AP5M1Q9H0R1 490 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 TRPM7Q96QT4 1865 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SMIM35A0A1B0GVV1 85 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PI4K2BG5E9Z4 385 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 GOLGA8SH3BPF8 625 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 TULP2O00295 520 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ATP8B1O43520 1251 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CA12O43570 354 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 RECQL4O94761 1208 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CTSHP09668 335 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SSR1P43307 286 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 TNNC1P63316 161 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SNX1Q13596 522 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 SIX1Q15475 284 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 RAB6CQ53S08 254 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PLEKHA7Q6IQ23 1121 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PHF13Q86YI8 300 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 EMC1Q8N766 993 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 UBL4BQ8N7F7 174 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ZNF784Q8NCA9 323 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 C1orf54Q8WWF1 131 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PIWIL1Q96J94 861 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM81BQ96LP2 452 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 HEXIM2Q96MH2 286 aaKnown RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ZFP42Q96MM3 310 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 RAB6CQ9H0N0 254 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 ASB7Q9H672 318 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 TTC7AQ9ULT0 858 aaPredicted RBP7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 PTPN22Q9Y2R2 807 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CITO14578 2027 aa7.86□□□□□ -1.15
SRFBP1-201ENST00000339397 CILPO75339 1184 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CCND3P30281 292 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TM4SF4P48230 202 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CPT1AP50416 773 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 NDST1P52848 882 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SOX4Q06945 474 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 HLTFQ14527 1009 aaKnown RBP eCLIP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 NBPF20Q3BBV1 942 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 GLE1Q53GS7 698 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SLC27A1Q6PCB7 646 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 PRUNE1Q86TP1 453 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 IFT20Q8IY31 132 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 C7orf31Q8N865 590 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 DDX27Q96GQ7 796 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 MRPL45Q9BRJ2 306 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 WNT8AQ9H1J5 351 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 LRRC4CQ9HCJ2 640 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 AVENQ9NQS1 362 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 RNF186Q9NXI6 227 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 R3HDM2Q9Y2K5 976 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SNX9Q9Y5X1 595 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 A0A0U1RQG5 324 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TCRBV5S1A1TA0A578 114 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 MIF4GDA9UHW6 222 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SPTLC1O15269 473 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TUBBP07437 444 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 RFC1P35251 1148 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 GRM5P41594 1212 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CACNB2Q08289 660 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 FAM47CQ5HY64 1035 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 UBXN11Q5T124 520 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 UBAP2Q5T6F2 1119 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 GDF6Q6KF10 455 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 SLC13A5Q86YT5 568 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 JOSD2Q8TAC2 188 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 FEZF2Q8TBJ5 459 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 MAGOHBQ96A72 148 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 RNF25Q96BH1 459 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CALR3Q96L12 384 aaKnown RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TRIM6Q9C030 488 aaPredicted RBP7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CHST7Q9NS84 486 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 FAN1Q9Y2M0 1017 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 C17orf102A2RUQ5 167 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 TMEM191CA6NGB0 347 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 KIF3CO14782 793 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 PROSCO94903 275 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 ERBB2P04626 1255 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 CYBAP13498 195 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 KRT10P13645 584 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 AKR1A1P14550 325 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 LMO2P25791 158 aa7.85□□□□□ -1.15
SRFBP1-201ENST00000339397 RWDD2BP57060 319 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms