RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 TXLNGYQ9BZA5 131 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 KIAA1586Q9HCI6 787 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 CACNG4Q9UBN1 327 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 PCYOX1Q9UHG3 505 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 SLC12A6Q9UHW9 1150 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 SIX4Q9UIU6 781 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 CPSF3Q9UKF6 684 aaKnown RBP9.38□□□□□ -0.91
SNCA-201ENST00000336904 ZNF148Q9UQR1 794 aa9.38□□□□□ -0.91
SNCA-201ENST00000336904 FAM187AA6NFU0 413 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 F5H423 210 aaPredicted RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 TULP2O00295 520 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 PMM2O15305 246 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ADCY6O43306 1168 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 POLR2BP30876 1174 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 RFC5P40937 340 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 SMAD1Q15797 465 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 CCDC142Q17RM4 750 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 P3H1Q32P28 736 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 CD302Q8IX05 232 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 C1orf127Q8N9H9 656 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 HSPH1Q92598 858 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 CPXM1Q96SM3 734 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 PRMT1Q99873 361 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 NIF3L1Q9GZT8 377 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 METTL5Q9NRN9 209 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 FAM49BQ9NUQ9 324 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MTRF1LQ9UGC7 380 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 SPDYE5A6NIY4 337 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 H0YCG3 227 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 LDHAP00338 332 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 GH1P01241 217 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 STAG3L1P0CL83 205 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ATF2P15336 505 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 IL1R2P27930 398 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MBTD1Q05BQ5 628 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MTMR3Q13615 1198 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ZKSCAN8Q15776 578 aaPredicted RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 IER5Q5VY09 327 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 FBXW10Q5XX13 1052 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 SESTD1Q86VW0 696 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ERICH1Q86X53 443 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 CYP4X1Q8N118 509 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 TMEM174Q8WUU8 243 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MAGEB5Q9BZ81 275 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 XYLT2Q9H1B5 865 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 EPN3Q9H201 632 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 IFT122Q9HBG6 1241 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ANAPC5Q9UJX4 755 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 DIS3Q9Y2L1 958 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 FSCN2O14926 492 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 RPS6KA5O75582 802 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 LGALS2P05162 132 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 MMP8P22894 467 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 NFX1Q12986 1120 aaKnown RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 MMRN1Q13201 1228 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 IZUMO3Q5VZ72 239 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 CCDC62Q6P9F0 684 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 RUFY4Q6ZNE9 571 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ZNF365Q70YC5 407 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ENOSF1Q7L5Y1 443 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 ANKMY2Q8IV38 441 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 RHOT1Q8IXI2 618 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.37□□□□□ -0.91
SNCA-201ENST00000336904 ART4Q93070 314 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 SYT17Q9BSW7 474 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 CDHR5Q9HBB8 845 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 KCNK9Q9NPC2 374 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 SETD4Q9NVD3 440 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 GPATCH2LQ9NWQ4 482 aa9.37□□□□□ -0.91
SNCA-201ENST00000336904 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.37□□□□□ -0.91
SNCA-201ENST00000336904 RASGRF2O14827 1237 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ZC3H11AO75152 810 aaKnown RBP eCLIP9.36□□□□□ -0.91
SNCA-201ENST00000336904 ARF4P18085 180 aaPredicted RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 RABGGTBP53611 331 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 GDF10P55107 478 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 NPNTQ6UXI9 565 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 LRIG3Q6UXM1 1119 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 WDR49Q8IV35 697 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 SLC10A4Q96EP9 437 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 RPF1Q9H9Y2 349 aaKnown RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 KIF9Q9HAQ2 790 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 AGAP1Q9UPQ3 857 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PPP2R3BQ9Y5P8 575 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ATP8B3O60423 1300 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 KAT6AQ92794 2004 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 M0QYV0 167 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PDHXO00330 501 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 C22orf31O95567 290 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PIGRP01833 764 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 TNNC2P02585 160 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ERBB2P04626 1255 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PSMA2P25787 234 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 IVDP26440 423 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 GCLCP48506 637 aaPredicted RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 BPIFB4P59827 614 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 PSMC1P62191 440 aaKnown RBP9.36□□□□□ -0.91
SNCA-201ENST00000336904 ATP11AP98196 1134 aa9.36□□□□□ -0.91
SNCA-201ENST00000336904 ARHGAP1Q07960 439 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms