RNA–Protein interactions for RNA: ENST00000336777.9

SSX2-201, Transcript of SSX family member 2, humanhuman

TSL 1 (best) BASIC

Gene SSX2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2-201ENST00000336777 RTP3Q9BQQ7 232 aa11.33□□□□□ -0.6
SSX2-201ENST00000336777 CORO1BQ9BR76 489 aa11.33□□□□□ -0.6
SSX2-201ENST00000336777 CHMP5Q9NZZ3 219 aa11.33□□□□□ -0.6
SSX2-201ENST00000336777 DNMT3BQ9UBC3 853 aaKnown RBP11.33□□□□□ -0.6
SSX2-201ENST00000336777 SLC27A5Q9Y2P5 690 aa11.33□□□□□ -0.6
SSX2-201ENST00000336777 R3HCC1Q9Y3T6 440 aaKnown RBP11.33□□□□□ -0.6
SSX2-201ENST00000336777 GTF3C5Q9Y5Q8 519 aaPredicted RBP11.33□□□□□ -0.6
SSX2-201ENST00000336777 DOCK8Q8NF50 2099 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 LRRIQ3A6PVS8 624 aaPredicted RBP11.32□□□□□ -0.6
SSX2-201ENST00000336777 PI4K2BG5E9Z4 385 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 KINO60870 393 aaKnown RBP11.32□□□□□ -0.6
SSX2-201ENST00000336777 ABLIM3O94929 683 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 HNRNPA1P09651 372 aaKnown RBP eCLIP11.32□□□□□ -0.6
SSX2-201ENST00000336777 TRIM49P0CI25 452 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 TRIM49CP0CI26 452 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 ATF2P15336 505 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 GJA1P17302 382 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 CEBPBP17676 345 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 NR2F2P24468 414 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 PSMC1P62191 440 aaKnown RBP11.32□□□□□ -0.6
SSX2-201ENST00000336777 DLG4P78352 724 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 DUSP4Q13115 394 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 PSMD2Q13200 908 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 TMEM31Q5JXX7 168 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 OTOP3Q7RTS5 596 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 TRAPPC11Q7Z392 1133 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 OSTM1Q86WC4 334 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 METTL23Q86XA0 190 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 ADGRF2Q8IZF7 708 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 PDCL2Q8N4E4 241 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 CXorf38Q8TB03 319 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 SMARCE1Q969G3 411 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 TCEAL4Q96EI5 215 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 CCDC34Q96HJ3 373 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 HPDLQ96IR7 371 aa11.32□□□□□ -0.6
SSX2-201ENST00000336777 ABI2Q9NYB9 513 aaPredicted RBP11.32□□□□□ -0.6
SSX2-201ENST00000336777 AFF4Q9UHB7 1163 aaKnown RBP11.32□□□□□ -0.6
SSX2-201ENST00000336777 COL4A3Q01955 1670 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 TRIM49BA6NDI0 452 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 OR6C75A6NL08 312 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 BIN1O00499 593 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 NARSO43776 548 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 CALUO43852 315 aaPredicted RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 HUS1O60921 280 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 PHACTR2O75167 634 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 OAZ2O95190 189 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 RHOP08100 348 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 MYL4P12829 197 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 ALADP13716 330 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 HOXA9P31269 272 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 PNPLA4P41247 253 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 RAP1GAPP47736 663 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 GPR15P49685 360 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 RBP5P82980 135 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 POU5F1Q01860 360 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 KCNB1Q14721 858 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 SURF1Q15526 300 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 DUOXA2Q1HG44 320 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 MGAT5BQ3V5L5 792 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 TDRD10Q5VZ19 366 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 C12orf56Q8IXR9 622 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 LRRC52Q8N7C0 313 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 GOLGA5Q8TBA6 731 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 GPR152Q8TDT2 470 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 BORCS6Q96GS4 357 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 LPIN3Q9BQK8 851 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 LRFN3Q9BTN0 628 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 C1QTNF1Q9BXJ1 281 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 RHOBTB2Q9BYZ6 727 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 KIAA1586Q9HCI6 787 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 TMLHEQ9NVH6 421 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 DDX43Q9NXZ2 648 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 CEP72Q9P209 647 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 DSEQ9UL01 958 aa11.31□□□□□ -0.6
SSX2-201ENST00000336777 MRPS23Q9Y3D9 190 aaKnown RBP11.31□□□□□ -0.6
SSX2-201ENST00000336777 TECTAO75443 2155 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 PDXKO00764 312 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 PDGFBP01127 241 aaPredicted RBP11.3□□□□□ -0.6
SSX2-201ENST00000336777 CYP11A1P05108 521 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 CCR2P41597 374 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 MYL6P60660 151 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 ZXDAP98168 799 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 MYO1EQ12965 1108 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 PLD1Q13393 1074 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 TRPC3Q13507 836 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 MTMR3Q13615 1198 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 SDHAF4Q5VUM1 108 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 TPGS2Q68CL5 300 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 NPAS3Q8IXF0 933 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 TCEAL8Q8IYN2 117 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 THEM5Q8N1Q8 247 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 FAM200AQ8TCP9 573 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 ZNF516Q92618 1163 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 FGF13Q92913 245 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 MMS19Q96T76 1030 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 KXD1Q9BQD3 176 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 ZCWPW1Q9H0M4 648 aa11.3□□□□□ -0.6
SSX2-201ENST00000336777 CGNQ9P2M7 1197 aaKnown RBP11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms