RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 IL9P15248 144 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 PTMSP20962 102 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 TSPY1Q01534 308 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 SMARCB1Q12824 385 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 GPR17Q13304 367 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 WDR72Q3MJ13 1102 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 ZACNQ401N2 412 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 CCDC40Q4G0X9 1142 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 TCERG1LQ5VWI1 586 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 SV2AQ7L0J3 742 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 GPR149Q86SP6 731 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 ZC3H3Q8IXZ2 948 aaKnown RBP16.96■□□□□ 0.31
MRPL55-202ENST00000336300 DCP1BQ8IZD4 617 aaKnown RBP16.96■□□□□ 0.31
MRPL55-202ENST00000336300 PDCL2Q8N4E4 241 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 ADAMTS19Q8TE59 1207 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 SUSD6Q92537 303 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 TAF4BQ92750 862 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 CYP4F11Q9HBI6 524 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 AFF4Q9UHB7 1163 aaKnown RBP16.96■□□□□ 0.31
MRPL55-202ENST00000336300 RWDD2AQ9UIY3 292 aa16.96■□□□□ 0.31
MRPL55-202ENST00000336300 VWA8A3KMH1 1905 aa16.96■□□□□ 0.3
MRPL55-202ENST00000336300 RFPL2O75678 378 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 LRG1P02750 347 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 FAM163BP0C2L3 166 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TRIM49P0CI25 452 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TRIM49CP0CI26 452 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 PCSK1P29120 753 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 HOXA9P31269 272 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 PIK3CAP42336 1068 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 GCLMP48507 274 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 STX17P56962 302 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 NLRP12P59046 1061 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 MYL6P60660 151 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 ADCY1Q08828 1119 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TPD52L1Q16890 204 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 ZNF699Q32M78 642 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 DCAF17Q5H9S7 520 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 ZNF667Q5HYK9 610 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 KRT39Q6A163 491 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TTI2Q6NXR4 508 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 FRMD5Q7Z6J6 570 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TCEAL8Q8IYN2 117 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 ADGRF2Q8IZF7 708 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 SLC7A14Q8TBB6 771 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 SMG7Q92540 1137 aaKnown RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 UHRF1Q96T88 793 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 ACBD6Q9BR61 282 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 PHF7Q9BWX1 381 aaPredicted RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 RHOBTB2Q9BYZ6 727 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 PRKD2Q9BZL6 878 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 SNX25Q9H3E2 840 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 MMRN2Q9H8L6 949 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 TMEM8AQ9HCN3 771 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 DDX43Q9NXZ2 648 aaKnown RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 NXF1Q9UBU9 619 aaKnown RBP16.95■□□□□ 0.3
MRPL55-202ENST00000336300 L1RE1Q9UN81 338 aa16.95■□□□□ 0.3
MRPL55-202ENST00000336300 SCN1AP35498 2009 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 SOWAHAQ2M3V2 549 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 CT47A1Q5JQC4 288 aaPredicted RBP16.94■□□□□ 0.3
MRPL55-202ENST00000336300 CCDC183Q5T5S1 534 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 SASS6Q6UVJ0 657 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 ADHFE1Q8IWW8 467 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 ELMOD1Q8N336 334 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 C2orf15Q8WU43 125 aaKnown RBP16.94■□□□□ 0.3
MRPL55-202ENST00000336300 DUSP9Q99956 384 aaKnown RBP16.94■□□□□ 0.3
MRPL55-202ENST00000336300 SRRTQ9BXP5 876 aaKnown RBP16.94■□□□□ 0.3
MRPL55-202ENST00000336300 ZCWPW1Q9H0M4 648 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 VRTNQ9H8Y1 702 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 POLIQ9UNA4 740 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
MRPL55-202ENST00000336300 TACC1O75410 805 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 CCDC192P0DO97 292 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 GNL1P36915 607 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-202ENST00000336300 MXI1P50539 228 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 MCCD1P59942 119 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-202ENST00000336300 CETN1Q12798 172 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 PLD1Q13393 1074 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 NFE2Q16621 373 aaPredicted RBP16.93■□□□□ 0.3
MRPL55-202ENST00000336300 SLC39A12Q504Y0 691 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 RNF19BQ6ZMZ0 732 aa16.93■□□□□ 0.3
MRPL55-202ENST00000336300 GABRDO14764 452 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 HLA-DRAP01903 254 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 WEE2P0C1S8 567 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 OR4Q2P0C623 313 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 TRIM21P19474 475 aaKnown RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 WARSP23381 471 aaKnown RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 ERCC5P28715 1186 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 SSTR3P32745 418 aaPredicted RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 ALDH1A3P47895 512 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 TUFMP49411 452 aaKnown RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 PPP3CAQ08209 521 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 MAPRE1Q15691 268 aaKnown RBP16.92■□□□□ 0.3
MRPL55-202ENST00000336300 WDR44Q5JSH3 913 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 C1orf220Q5T0J3 134 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 FBXL13Q8NEE6 735 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 OR6B3Q8NGW1 331 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 OR10T2Q8NGX3 314 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 PGLYRP2Q96PD5 576 aa16.92■□□□□ 0.3
MRPL55-202ENST00000336300 DNAI2Q9GZS0 605 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms