RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 GHRP10912 638 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 SLC16A1P53985 500 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 EFHC1Q5JVL4 640 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 USP33Q8TEY7 942 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 GDPD5Q8WTR4 605 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 WDR60Q8WVS4 1066 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 ANKRD27Q96NW4 1050 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 FAM217BQ9NTX9 383 aaPredicted RBP10.23□□□□□ -0.77
COL4A6-201ENST00000334504 PLXNC1O60486 1568 aa10.23□□□□□ -0.77
COL4A6-201ENST00000334504 S100A9P06702 114 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SOAT1P35610 550 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 PPP3CCP48454 512 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 INTS13Q9NVM9 706 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 UVRAGQ9P2Y5 699 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 DDX20Q9UHI6 824 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 FKBP6O75344 327 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 EIF2S1P05198 315 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ALOX12P18054 663 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 CCT3P49368 545 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SULT1E1P49888 294 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 STX5Q13190 355 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 KCNB1Q14721 858 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SLC25A41Q8N5S1 370 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SHCBP1Q8NEM2 672 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ASAP3Q8TDY4 903 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 RSPH1Q8WYR4 309 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 FOXP3Q9BZS1 431 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 LY9Q9HBG7 655 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 HPS5Q9UPZ3 1129 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 C3orf70A6NLC5 250 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 STX7O15400 261 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SPAG6O75602 509 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ATP4AP20648 1035 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 PSMB9P28065 219 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 CENPAP49450 140 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ITGB3BPQ13352 177 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SGO1Q5FBB7 561 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 CENPLQ8N0S6 344 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 GPD1LQ8N335 351 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SNX31Q8N9S9 440 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 CPVLQ9H3G5 476 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 TRIM49D1C9J1S8 452 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 PHKG2P15735 406 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 COMTP21964 271 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 KRT76Q01546 638 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 UXS1Q8NBZ7 420 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 PPP2R3CQ969Q6 453 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 TADA1Q96BN2 335 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 NARS2Q96I59 477 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 GCNAQ96QF7 691 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 CEP44Q9C0F1 390 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 RXFP1Q9HBX9 757 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 TRPC7Q9HCX4 862 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SEC31BQ9NQW1 1179 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ADAM30Q9UKF2 790 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SERPIND1P05546 499 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ATP6V1B2P21281 511 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 MAPK10P53779 464 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 NFIL3Q16649 462 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 WASHC2DQ5SRD0 308 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 RCSD1Q6JBY9 416 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 C11orf88Q6PI97 169 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 RDM1Q8NG50 284 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 STK33Q9BYT3 514 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ARHGAP31Q2M1Z3 1444 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 TPI1P60174 286 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SLC34A1Q06495 639 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ZNF235Q14590 738 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 UGP2Q16851 508 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 KBTBD12Q3ZCT8 623 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ZBTB49Q6ZSB9 765 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 AFG1LQ8WV93 481 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 SEPT1Q8WYJ6 367 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 ZFRQ96KR1 1074 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 MCEEQ96PE7 176 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 DEPDC7Q96QD5 511 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 THUMPD3Q9BV44 507 aaKnown RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 DMAP1Q9NPF5 467 aaPredicted RBP10.22□□□□□ -0.77
COL4A6-201ENST00000334504 RIC8BQ9NVN3 520 aa10.22□□□□□ -0.77
COL4A6-201ENST00000334504 EVPLLA8MZ36 301 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 GYPCP04921 128 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 TRIQKQ629K1 86 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 CATSPER4Q7RTX7 472 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 APPL2Q8NEU8 664 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PRCCQ92733 491 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-201ENST00000334504 MBD2Q9UBB5 411 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 ABCB11O95342 1321 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 GOLGA8TH3BQL2 631 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PSMD3O43242 534 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 CLASP2O75122 1294 aaKnown RBP10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PARNO95453 639 aaKnown RBP10.21□□□□□ -0.77
COL4A6-201ENST00000334504 KRT6BP04259 564 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 KRT6CP48668 564 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 MTMR1Q13613 665 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 NKX1-1Q15270 411 aaPredicted RBP10.21□□□□□ -0.77
COL4A6-201ENST00000334504 RASA2Q15283 850 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 MAPK6Q16659 721 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 PDZK1Q5T2W1 519 aa10.21□□□□□ -0.77
COL4A6-201ENST00000334504 LMBRD2Q68DH5 695 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms