RNA–Protein interactions for RNA: ENST00000331462.5

HOXD1-201, Transcript of homeobox D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD1, Length 1,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD1-201ENST00000331462 GGT7Q9UJ14 662 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 ZNF214Q9UL59 606 aaPredicted RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 SMG5Q9UPR3 1016 aaKnown RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 MAFBQ9Y5Q3 323 aaPredicted RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 DOCK5Q9H7D0 1870 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 COL11A1P12107 1806 aaPredicted RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 PHIPQ8WWQ0 1821 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 GJC1P36383 396 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 AP3M2P53677 418 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 VCPP55072 806 aaKnown RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 RPL7AP62424 266 aaKnown RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 SNRNP48Q6IEG0 339 aaKnown RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 SPOCD1Q6ZMY3 1216 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 PRUNE1Q86TP1 453 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 ECHDC2Q86YB7 292 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 NIPA2Q8N8Q9 360 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 ANKLE1Q8NAG6 615 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 GLIS1Q8NBF1 620 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 DEPTORQ8TB45 409 aa23.83■■□□□ 1.41
HOXD1-201ENST00000331462 EPB41L3Q9Y2J2 1087 aaPredicted RBP23.83■■□□□ 1.41
HOXD1-201ENST00000331462 ATP2A1O14983 1001 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ALOX15BO15296 676 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ATG7O95352 703 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ITGAVP06756 1048 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 PECAM1P16284 738 aaPredicted RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 SSR1P43307 286 aaKnown RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 BACE1P56817 501 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 TAP1Q03518 808 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 NCOA4Q13772 614 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ZBTB41Q5SVQ8 909 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 RNASEH2BQ5TBB1 312 aaKnown RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 OR5B17Q8NGF7 314 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ZBTB45Q96K62 511 aaPredicted RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 PITPNM3Q9BZ71 974 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 TMEM134Q9H6X4 195 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 PCDH9Q9HC56 1237 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 PNMA3Q9UL41 463 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ZNF148Q9UQR1 794 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 hCG_1818297A0A087WSY0 165 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 K7ERI5 159 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 OATP04181 439 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 KRT10P13645 584 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ATP4AP20648 1035 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ARSEP51690 589 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 GRM1Q13255 1194 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 PPP1R15BQ5SWA1 713 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 L3MBTL3Q96JM7 780 aaPredicted RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 ZNF518BQ9C0D4 1074 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 DDX56Q9NY93 547 aaKnown RBP23.82■■□□□ 1.4
HOXD1-201ENST00000331462 CYP39A1Q9NYL5 469 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 SLC24A2Q9UI40 661 aa23.82■■□□□ 1.4
HOXD1-201ENST00000331462 LOC285556D6RIA3 1793 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 PI4K2BG5E9Z4 385 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 ASS1P00966 412 aaKnown RBP23.81■■□□□ 1.4
HOXD1-201ENST00000331462 TCF4P15884 667 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 ZNF280AP59817 542 aaPredicted RBP23.81■■□□□ 1.4
HOXD1-201ENST00000331462 ATP13A4Q4VNC1 1196 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 TMEM143Q96AN5 459 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 C12orf42Q96LP6 360 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 TARS2Q9BW92 718 aaKnown RBP23.81■■□□□ 1.4
HOXD1-201ENST00000331462 KLHL11Q9NVR0 708 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 FETUBQ9UGM5 382 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 IVNS1ABPQ9Y6Y0 642 aa23.81■■□□□ 1.4
HOXD1-201ENST00000331462 UNC5CO95185 931 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 KRT16P08779 473 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 CDH5P33151 784 aaPredicted RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 PIGHQ14442 188 aaPredicted RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 SPARCL1Q14515 664 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 BRSK2Q8IWQ3 736 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 FBF1Q8TES7 1133 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 NIFKQ9BYG3 293 aaKnown RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 IMPG2Q9BZV3 1241 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 TRABDQ9H4I3 376 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 FBXO40Q9UH90 709 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 MYH9P35579 1960 aaKnown RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 LRRIQ4A6NIV6 560 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 YARSP54577 528 aaKnown RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 TGFB2P61812 414 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 SP4Q02446 784 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 GPS1Q13098 491 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 TFDP3Q5H9I0 405 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 DNAJC24Q6P3W2 148 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 GPATCH11Q8N954 259 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 AGAP11Q8TF27 550 aa23.8■■□□□ 1.4
HOXD1-201ENST00000331462 SSU72Q9NP77 194 aaKnown RBP23.8■■□□□ 1.4
HOXD1-201ENST00000331462 ZSCAN5DPP0CG00 497 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 ATF7P17544 494 aaPredicted RBP23.79■■□□□ 1.4
HOXD1-201ENST00000331462 KCNA3P22001 575 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 CCND1P24385 295 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 SSTR3P32745 418 aaPredicted RBP23.79■■□□□ 1.4
HOXD1-201ENST00000331462 ICAM3P32942 547 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 CDKN2BP42772 138 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 MOGSQ13724 837 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 PDK4Q16654 411 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 KAZNQ674X7 775 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 CIAPIN1Q6FI81 312 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 POLNQ7Z5Q5 900 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 WDR49Q8IV35 697 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 SLC35B2Q8TB61 432 aa23.79■■□□□ 1.4
HOXD1-201ENST00000331462 ZNF302Q9NR11 478 aa23.79■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms