RNA–Protein interactions for RNA: ENST00000330374.6

VMA21-201, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VMA21, Length 4,717 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-201ENST00000330374 MOXD1Q6UVY6 613 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 ACCSQ96QU6 501 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 MOV10L1Q9BXT6 1211 aaKnown RBP8.32□□□□□ -1.08
VMA21-201ENST00000330374 TUFT1Q9NNX1 390 aa8.32□□□□□ -1.08
VMA21-201ENST00000330374 SMAPO00193 183 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 GH2P01242 217 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 KITP10721 976 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 NR1H3Q13133 447 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 TFDP1Q14186 410 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 SNRNP35Q16560 246 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 WASHC2DQ5SRD0 308 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 SPOPLQ6IQ16 392 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 LRRC74BQ6ZQY2 392 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 TCP10LQ8TDR4 215 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 CLPTM1LQ96KA5 538 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 TMEM121Q9BTD3 319 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 C2orf72A6NCS6 295 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PSMD10O75832 226 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ACADSP16219 412 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 NEK3P51956 506 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 CAV1Q03135 178 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 RINLQ6ZS11 566 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MIER3Q7Z3K6 550 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PTPRN2Q92932 1015 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 SEL1LQ9UBV2 794 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MARCOQ9UEW3 520 aaPredicted RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 KIF13BQ9NQT8 1826 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 RANBP1P43487 201 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ARFIP2P53365 341 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 KDSRQ06136 332 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PLA2G4FQ68DD2 849 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PRR5LQ6MZQ0 368 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 DCAF4Q8WV16 495 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 SHC3Q92529 594 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 FAM163AQ96GL9 167 aaPredicted RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 PRR12Q9ULL5 1215 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MAST2Q6P0Q8 1798 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 CCDC195A0A1B0GUA6 201 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PIK3CDO00329 1044 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 IPO5O00410 1097 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 USP1O94782 785 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ENO1P06733 434 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 GYS1P13807 737 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 AMPD1P23109 780 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MAN1A1P33908 653 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ECE1P42892 770 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 RPS6KA3P51812 740 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ROR2Q01974 943 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 PPP2R5CQ13362 524 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 CLEC16AQ2KHT3 1053 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 BBS9Q3SYG4 887 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 FOXB2Q5VYV0 432 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 SIAH1Q8IUQ4 282 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MCOLN2Q8IZK6 566 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 CFAP61Q8NHU2 1237 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 DENND1AQ8TEH3 1009 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 MAIP1Q8WWC4 291 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 AKT1S1Q96B36 256 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ZC3H12CQ9C0D7 883 aaKnown RBP8.31□□□□□ -1.08
VMA21-201ENST00000330374 GINM1Q9NU53 330 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 ANKFY1Q9P2R3 1169 aa8.31□□□□□ -1.08
VMA21-201ENST00000330374 PLIN4Q96Q06 1357 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 KLHL33A6NCF5 533 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 GSC2O15499 205 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 CCDC22O60826 627 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 KRT1P04264 644 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 SP4Q02446 784 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 LAMB3Q13751 1172 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 ABCB5Q2M3G0 1257 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TRAPPC3LQ5T215 181 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 KRT39Q6A163 491 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 CCDC62Q6P9F0 684 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 BTBD10Q9BSF8 475 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TEKT3Q9BXF9 490 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 DBNDD1Q9H9R9 158 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 H3BRJ5 948 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 MTA2O94776 668 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 PSMG1O95456 288 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 SOX11P35716 441 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 PGM1P36871 562 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 JAG1P78504 1218 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 SLC15A2Q16348 729 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 CEP55Q53EZ4 464 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 KBTBD2Q8IY47 623 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 ZCCHC9Q8N567 271 aaKnown RBP8.3□□□□□ -1.08
VMA21-201ENST00000330374 ENDOVQ8N8Q3 282 aaKnown RBP8.3□□□□□ -1.08
VMA21-201ENST00000330374 HELQQ8TDG4 1101 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TEKT1Q969V4 418 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 MKL1Q969V6 931 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TMEM120AQ9BXJ8 343 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 RAB20Q9NX57 234 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 LRCH1Q9Y2L9 728 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 LAMB2P55268 1798 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 TLR3O15455 904 aaKnown RBP8.3□□□□□ -1.08
VMA21-201ENST00000330374 NPTXRO95502 500 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 POLR2MP0CAP2 368 aa8.3□□□□□ -1.08
VMA21-201ENST00000330374 BGNP21810 368 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms