RNA–Protein interactions for RNA: ENST00000328736.7

PTPN21-201, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN21, Length 6,089 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-201ENST00000328736 RFX8Q6ZV50 586 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SETD3Q86TU7 594 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ATP6V0D2Q8N8Y2 350 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 DIS3LQ8TF46 1054 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SLITRK1Q96PX8 696 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 CINPQ9BW66 212 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ADAM33Q9BZ11 813 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ALDH8A1Q9H2A2 487 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 TMEM245Q9H330 911 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 EIF4E1BA6NMX2 242 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 MYO1CO00159 1063 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 GPD1P21695 349 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SNRNP35Q16560 246 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 DDX42Q86XP3 938 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 RSAD1Q9HA92 442 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ALG13Q9NP73 1137 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ADGRA2Q96PE1 1338 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 GRIN3BO60391 1043 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 ENO3P13929 434 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 HNRNPH2P55795 449 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 BYSLQ13895 437 aaKnown RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 BAATQ14032 418 aaPredicted RBP16.11■□□□□ 0.17
PTPN21-201ENST00000328736 DGKDQ16760 1214 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 LINC00523Q86TU6 105 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 SGMS1Q86VZ5 419 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 CACNA2D2Q9NY47 1150 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 AMACRQ9UHK6 382 aa16.11■□□□□ 0.17
PTPN21-201ENST00000328736 TCP11X1B4DZS4 312 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CYTH3O43739 400 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ADCY3O60266 1144 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 FMR1Q06787 632 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 KIAA2013Q8IYS2 634 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CCDC134Q9H6E4 229 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 PRMT7Q9NVM4 692 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CROCC2H7BZ55 1655 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TTLL9Q3SXZ7 439 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 C12orf60Q5U649 245 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CYGBQ8WWM9 190 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 THAP11Q96EK4 314 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TSEN34Q9BSV6 310 aaKnown RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 APOL5Q9BWW9 433 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 PALMDQ9NP74 551 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 FBXO2Q9UK22 296 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 NEU2Q9Y3R4 380 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 H7C4K7 107 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 FMO5P49326 533 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 GOLGA7BQ2TAP0 167 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 NAPEPLDQ6IQ20 393 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TRIM65Q6PJ69 517 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 BRD8Q9H0E9 1235 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ZCCHC17Q9NP64 241 aaKnown RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 PCMTD2Q9NV79 361 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CNOT7Q9UIV1 285 aaKnown RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 GOLGA8RI6L899 631 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CNTN1Q12860 1018 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TMEM132BQ14DG7 1078 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ZNF677Q86XU0 584 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 RBM15Q96T37 977 aaKnown RBP eCLIP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CRLS1Q9UJA2 301 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TOMM70O94826 608 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 RHOBTB1O94844 696 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ALOX15P16050 662 aaPredicted RBP16.1■□□□□ 0.17
PTPN21-201ENST00000328736 E2F4Q16254 413 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ANKS6Q68DC2 871 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 CHSY1Q86X52 802 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TRIM10Q9UDY6 481 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
PTPN21-201ENST00000328736 ENTPD3O75355 529 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 STAG3L1P0CL83 205 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 PYGMP11217 842 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 MDH1BQ5I0G3 518 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 C10orf120Q5SQS8 335 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 NOTUMQ6P988 496 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 CRAMP1Q96RY5 1269 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 TMEM117Q9H0C3 514 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 MRFAP1Q9Y605 127 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 SOAT2O75908 522 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 SLC2A3P11169 496 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 CETPP11597 493 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 PTK7Q13308 1070 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 SLC18A3Q16572 532 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 IRX2Q9BZI1 471 aaPredicted RBP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 ASCC2Q9H1I8 757 aaPredicted RBP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 KCNF1Q9H3M0 494 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 VWA5AO00534 786 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 ODC1P11926 461 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 DEFA1P59665 94 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 DEFA3P59666 94 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 CCDC142Q17RM4 750 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 IPMKQ8NFU5 416 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 SLC30A5Q8TAD4 765 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 LIMA1Q9UHB6 759 aaKnown RBP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 AGGF1Q8N302 714 aaeCLIP16.09■□□□□ 0.17
PTPN21-201ENST00000328736 CHST13Q8NET6 341 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 WDR24Q96S15 920 aa16.09■□□□□ 0.17
PTPN21-201ENST00000328736 FAM167BQ9BTA0 163 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms