RNA–Protein interactions for RNA: ENST00000324862.6

PRPF3-201, Transcript of pre-mRNA processing factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF3, Length 2,433 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-201ENST00000324862 CCDC112Q8NEF3 446 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 CCDC42Q96M95 316 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 LBHD1Q9BQE6 289 aaPredicted RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 SYT11Q9BT88 431 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 CWH43Q9H720 699 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 SEPT11Q9NVA2 429 aaKnown RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 CNTN6Q9UQ52 1028 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 REXO2Q9Y3B8 237 aaKnown RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 ARHGAP6O43182 974 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 HOXA2O43364 376 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 GALTP07902 379 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 P4HA1P13674 534 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 FAM109BQ6ICB4 259 aaPredicted RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 LRRC43Q8N309 656 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 SLC4A11Q8NBS3 891 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 APPL2Q8NEU8 664 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 DDX1Q92499 740 aaKnown RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 PCDHB18PQ96TA0 734 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 YME1L1Q96TA2 773 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 TRMT1Q9NXH9 659 aaKnown RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 TAS2R14Q9NYV8 317 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 ZKSCAN5Q9Y2L8 839 aa16.31■□□□□ 0.2
PRPF3-201ENST00000324862 EPN1Q9Y6I3 576 aaPredicted RBP16.31■□□□□ 0.2
PRPF3-201ENST00000324862 TMCO5BA8MYB1 307 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 DDX3XO00571 662 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 HUS1O60921 280 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 ATP2C2O75185 946 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 NDUFA10O95299 355 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 ABL1P00519 1130 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 GNA15P30679 374 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 MAGEA10P43363 369 aaPredicted RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 AARSP49588 968 aaKnown RBP eCLIP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 BTG3Q14201 252 aaPredicted RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 DCLRE1AQ6PJP8 1040 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 ACOT1Q86TX2 421 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 PASD1Q8IV76 773 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 ADGRF2Q8IZF7 708 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 RSPH1Q8WYR4 309 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 DDX27Q96GQ7 796 aaKnown RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 GPR62Q9BZJ7 368 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 MRPL42Q9Y6G3 142 aaKnown RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 PTPRSQ13332 1948 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 FNDC1Q4ZHG4 1894 aaPredicted RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 LCHNA4D1U4 455 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 GRXCR1A8MXD5 290 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 AKR1B10O60218 316 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 GJB5O95377 273 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 PSMC1P62191 440 aaKnown RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 CDK17Q00537 523 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 HS1BP3Q53T59 392 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 KIAA0319Q5VV43 1072 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 PSRC1Q6PGN9 363 aaPredicted RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 SPRED2Q7Z698 418 aa16.3■□□□□ 0.2
PRPF3-201ENST00000324862 BARX2Q9UMQ3 279 aaPredicted RBP16.3■□□□□ 0.2
PRPF3-201ENST00000324862 ALDH2P05091 517 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 CD19P15391 556 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 PDE6CP51160 858 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 FMO1Q01740 532 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 INCA1Q0VD86 236 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 LIMS2Q7Z4I7 341 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 JAKMIP2Q96AA8 810 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 AGPAT1Q99943 283 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 MRPL9Q9BYD2 267 aaKnown RBP16.29■□□□□ 0.2
PRPF3-201ENST00000324862 CYP3A43Q9HB55 503 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 FAM49BQ9NUQ9 324 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 FAN1Q9Y2M0 1017 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 DAAM1Q9Y4D1 1078 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 SZT2Q5T011 3432 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 A8MXQ7 604 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 THAP12O43422 761 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 EFCAB14O75071 495 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 TADA2AO75478 443 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 TKTP29401 623 aaKnown RBP16.29■□□□□ 0.2
PRPF3-201ENST00000324862 GNL1P36915 607 aaPredicted RBP16.29■□□□□ 0.2
PRPF3-201ENST00000324862 RABGGTBP53611 331 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 MAPK8IP2Q13387 824 aaPredicted RBP16.29■□□□□ 0.2
PRPF3-201ENST00000324862 SPOUT1Q5T280 376 aaKnown RBP16.29■□□□□ 0.2
PRPF3-201ENST00000324862 TAS1R1Q7RTX1 841 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 TMEM176AQ96HP8 235 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 FAM81BQ96LP2 452 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 UROC1Q96N76 676 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 PACSIN1Q9BY11 444 aa16.29■□□□□ 0.2
PRPF3-201ENST00000324862 RCCD1A6NED2 376 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 MYOGP15173 224 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 C2CD6Q53TS8 623 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 TOP6BLQ8N6T0 577 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 KIAA1524Q8TCG1 905 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 ZNF606Q8WXB4 792 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 HERVK_113Q902F9 699 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 HEXIM2Q96MH2 286 aaKnown RBP16.28■□□□□ 0.2
PRPF3-201ENST00000324862 TMEM209Q96SK2 561 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 ZBED2Q9BTP6 218 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 ADAM28Q9UKQ2 775 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 STXBP5LQ9Y2K9 1186 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 SLC4A7Q9Y6M7 1214 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 SSU72P8A0A1W2PR75 194 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 SHHQ15465 462 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 CEP57Q86XR8 500 aa16.28■□□□□ 0.2
PRPF3-201ENST00000324862 RTP3Q9BQQ7 232 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 144.1 ms