RNA–Protein interactions for RNA: ENST00000322213.8

SMC1A-201, Transcript of structural maintenance of chromosomes 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC1A, Length 9,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-201ENST00000322213 SENP7Q9BQF6 1050 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 COG4Q9H9E3 785 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 STMN3Q9NZ72 180 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ZC3H7BQ9UGR2 993 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 AGLP35573 1532 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 UMODL1Q5DID0 1318 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 POTEMA6NI47 508 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ERVV-2B6SEH9 535 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 USP4Q13107 963 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 SCFD1Q8WVM8 642 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ADPGKQ9BRR6 497 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 RIPK2O43353 540 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 TMEM191BP0C7N4 346 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 BCAMP50895 628 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 GALCP54803 685 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 EAPPQ56P03 285 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 LUZP2Q86TE4 346 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 HPS3Q969F9 1004 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 C6orf203Q9P0P8 240 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 MAST2Q6P0Q8 1798 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ABCC6O95255 1503 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 APOA4P06727 396 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 POLR2MP0CAP2 368 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 SRGAP2CP0DJJ0 459 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ENO3P13929 434 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 NLRP10Q86W26 655 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 DGCR14Q96DF8 476 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 VPS39Q96JC1 886 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 AGPAT1Q99943 283 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 WDR11Q9BZH6 1224 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 PLGRKTQ9HBL7 147 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ADGRB1O14514 1584 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 DPPA5A6NC42 116 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CFBP00751 764 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 DRD4P21917 467 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ARL4AP40617 200 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 YARSP54577 528 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 GET4Q7L5D6 327 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 LCORLQ8N3X6 602 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 FBXL16Q8N461 479 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ARHGEF26Q96DR7 871 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 APOL4Q9BPW4 351 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 WDR12Q9GZL7 423 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CDC42EP4Q9H3Q1 356 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 GOLGA8IPA6NC78 632 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 F8W031 263 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 NFIBO00712 420 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 RFC4P35249 363 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ABCE1P61221 599 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 RUNX1T1Q06455 604 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ITGA9Q13797 1035 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 BRDTQ58F21 947 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 TSEN2Q8NCE0 465 aaKnown RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF398Q8TD17 642 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 CALML6Q8TD86 181 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 SPATA17Q96L03 361 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 FRMD8Q9BZ67 464 aaPredicted RBP7.37□□□□□ -1.23
SMC1A-201ENST00000322213 PCMTD2Q9NV79 361 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 COPG2Q9UBF2 871 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 SOX13Q9UN79 622 aa7.37□□□□□ -1.23
SMC1A-201ENST00000322213 ALOX15P16050 662 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 RPL5P46777 297 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 FMO5P49326 533 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NR1H2P55055 460 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 BNC2Q6ZN30 1099 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TRPC4APQ8TEL6 797 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 APPL1Q9UKG1 709 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 LMTK3Q96Q04 1460 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ARHGEF17Q96PE2 2063 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 A0A087WXM4 84 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 SP4Q02446 784 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 LACTB2Q53H82 288 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NLRX1Q86UT6 975 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PSPC1Q8WXF1 523 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 LRRC39Q96DD0 335 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PHF20Q9BVI0 1012 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 WDR35Q9P2L0 1181 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 BARX2Q9UMQ3 279 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 GTPBP10A4D1E9 387 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 VAMP7P51809 220 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 OTUD4Q01804 1114 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 FAM47CQ5HY64 1035 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 KLHDC7AQ5VTJ3 777 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TPTE2Q6XPS3 522 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TSPAN14Q8NG11 270 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 DLG3Q92796 817 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF496Q96IT1 587 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ZNF577Q9BSK1 485 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PRR23D1E9PI22 279 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 TBC1D12O60347 775 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PRR23D2P0DMB1 279 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PPARGP37231 505 aaPredicted RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 ACADVLP49748 655 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 NR1D2Q14995 579 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 MAPKAPK5Q8IW41 473 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 E2F7Q96AV8 911 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 PPP1R36Q96LQ0 422 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 HACD3Q9P035 362 aa7.36□□□□□ -1.23
SMC1A-201ENST00000322213 RTCBQ9Y3I0 505 aaKnown RBP7.36□□□□□ -1.23
SMC1A-201ENST00000322213 RAG1P15918 1043 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms