RNA–Protein interactions for RNA: ENST00000317147.9

CNOT1-201, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNOT1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-201ENST00000317147 GRID1Q9ULK0 1009 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TFR2Q9UP52 801 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TJP1Q07157 1748 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 NALCNQ8IZF0 1738 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 NID2Q14112 1375 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 RNF103-CHMP3A0A140T963 221 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PHF20L1A8MW92 1017 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PIK3CDO00329 1044 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 OCM2P0CE71 109 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 OCMP0CE72 109 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PCNAP12004 261 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SARSP49591 514 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 COPZ1P61923 177 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SLC15A2Q16348 729 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 THOC7Q6I9Y2 204 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 RAD9BQ6WBX8 426 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 CDKL3Q8IVW4 592 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ZBTB38Q8NAP3 1195 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DIS3LQ8TF46 1054 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ZBTB18Q99592 522 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DDX47Q9H0S4 455 aaKnown RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ZFYVE1Q9HBF4 777 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 EMILIN3Q9NT22 766 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 APPL1Q9UKG1 709 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 CRB1P82279 1406 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 ROBO3Q96MS0 1386 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 MAGEC1O60732 1142 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SMNDC1O75940 238 aaKnown RBP eCLIP4.72□□□□□ -1.654e-80■□□□□ 11.1
CNOT1-201ENST00000317147 TOP3AQ13472 1001 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 DNAJC24Q6P3W2 148 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM50Q86XT4 487 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SVOPQ8N4V2 548 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 PNMA1Q8ND90 353 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 FAM124BQ9H5Z6 455 aaPredicted RBP4.72□□□□□ -1.65
CNOT1-201ENST00000317147 VPS9D1Q9Y2B5 631 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 SLX4Q8IY92 1834 aa4.72□□□□□ -1.65
CNOT1-201ENST00000317147 BTBD19C9JJ37 291 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 H0YJX3 145 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 PSMD3O43242 534 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 TRPA1O75762 1119 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 CDH3P22223 829 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 PPIL2Q13356 520 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 PIGHQ14442 188 aaPredicted RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 STILQ15468 1287 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 TRIP13Q15645 432 aaPredicted RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 RFX4Q33E94 735 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 RABL6Q3YEC7 729 aaPredicted RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 TMEM63BQ5T3F8 832 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 KIAA1841Q6NSI8 718 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 RGS9BPQ6ZS82 235 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ADAT2Q7Z6V5 191 aaKnown RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 LUZP2Q86TE4 346 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 LRRC6Q86X45 466 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 NCAPG2Q86XI2 1143 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 SHCBP1Q8NEM2 672 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 NEDD1Q8NHV4 660 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF420Q8TAQ5 688 aaPredicted RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ENKURQ8TC29 256 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ASAP3Q8TDY4 903 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 C9orf16Q9BUW7 83 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 L3MBTL1Q9Y468 752 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ZNF609O15014 1411 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 KDM3BQ7LBC6 1761 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ERBB3P21860 1342 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 VPS4BO75351 444 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 FTCDO95954 541 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 BCL10O95999 233 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 NR3C1P04150 777 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 PRDX6P30041 224 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 STIP1P31948 543 aaKnown RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 KRT20P35900 424 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ITGA1P56199 1179 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ENPEPQ07075 957 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 OLFML2BQ68BL8 750 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 BARGINQ6ZT62 677 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 DHDDSQ86SQ9 333 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ANKRD13AQ8IZ07 590 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 GDAP1Q8TB36 358 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 ACMSDQ8TDX5 336 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 DACH2Q96NX9 599 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 MRPL46Q9H2W6 279 aaKnown RBP4.71□□□□□ -1.65
CNOT1-201ENST00000317147 TRIM39Q9HCM9 518 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 CCNB1IP1Q9NPC3 277 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 GIN1Q9NXP7 522 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 FADS3Q9Y5Q0 445 aa4.71□□□□□ -1.65
CNOT1-201ENST00000317147 A6NJR5 290 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 RAD51CO43502 376 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 SNX3O60493 162 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 CAND2O75155 1236 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 SNRPAP09012 282 aaKnown RBP4.71□□□□□ -1.66
CNOT1-201ENST00000317147 EFTUD2Q15029 972 aaKnown RBP eCLIP4.71□□□□□ -1.667e-7■■□□□ 13.7
CNOT1-201ENST00000317147 LRRC36Q1X8D7 754 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 ADCK1Q86TW2 530 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 CREG2Q8IUH2 290 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 TPCN2Q8NHX9 752 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 RNF217Q8TC41 542 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 EFCAB1Q9HAE3 211 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 EURLQ9NYK6 297 aa4.71□□□□□ -1.66
CNOT1-201ENST00000317147 PRPF19Q9UMS4 504 aaKnown RBP4.71□□□□□ -1.66
CNOT1-201ENST00000317147 ARHGAP23Q9P227 1491 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms