RNA–Protein interactions for RNA: ENST00000316948.8

CACFD1-202, Transcript of calcium channel flower domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CACFD1, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-202ENST00000316948 ATP13A4Q4VNC1 1196 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 HAUS1Q96CS2 278 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 GJD4Q96KN9 370 aaPredicted RBP17.21■□□□□ 0.35
CACFD1-202ENST00000316948 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.21■□□□□ 0.35
CACFD1-202ENST00000316948 DNPEPQ9ULA0 475 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 ZHX2Q9Y6X8 837 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 SLC16A4O15374 487 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 ZBED4O75132 1171 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 LGR5O75473 907 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 PSMG1O95456 288 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 UBTFL6P0CB48 400 aaPredicted RBP17.21■□□□□ 0.35
CACFD1-202ENST00000316948 SLC34A1Q06495 639 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 KRT39Q6A163 491 aa17.21■□□□□ 0.35
CACFD1-202ENST00000316948 TCP10L2B9ZVM9 353 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SMAPO00193 183 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 ATF7P17544 494 aaPredicted RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SLC1A1P43005 524 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 TRAF1Q13077 416 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 PDIA2Q13087 525 aaKnown RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SNRNP35Q16560 246 aaKnown RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 RINLQ6ZS11 566 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 HAUS6Q7Z4H7 955 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 LRRC6Q86X45 466 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 PASD1Q8IV76 773 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 APLFQ8IW19 511 aaPredicted RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 TAB3Q8N5C8 712 aaPredicted RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 PPFIBP2Q8ND30 876 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 MRIQ9BWK5 157 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 IFNB1P01574 187 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SERPINB3P29508 390 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 PEX3P56589 373 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 TDRPQ86YL5 185 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SEPT12Q8IYM1 358 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 IL31RAQ8NI17 732 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 NSL1Q96IY1 281 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SENP1Q9P0U3 644 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 SERPINA10Q9UK55 444 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 RPL26L1Q9UNX3 145 aaKnown RBP17.2■□□□□ 0.34
CACFD1-202ENST00000316948 WASF2Q9Y6W5 498 aa17.2■□□□□ 0.34
CACFD1-202ENST00000316948 ZNFX1Q9P2E3 1918 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 DNALI1O14645 258 aaPredicted RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 CPA2P48052 419 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 RARRES1P49788 294 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 MTHFD1LQ6UB35 978 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 RHOT1Q8IXI2 618 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 PDCD7Q8N8D1 485 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 TCP10LQ8TDR4 215 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 TTC25Q96NG3 672 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 MXRA8Q9BRK3 442 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 C11orf70Q9BRQ4 267 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 SLC17A7Q9P2U7 560 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 PSMC3IPQ9P2W1 217 aaPredicted RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 MRPL11Q9Y3B7 192 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 PROSCO94903 275 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 ZWINTO95229 277 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 ZCCHC18P0CG32 403 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 NSFP46459 744 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 SERPINB4P48594 390 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 OCRLQ01968 901 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 THOC5Q13769 683 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 LDHDQ86WU2 507 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 PTPRN2Q92932 1015 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 KIFC3Q9BVG8 833 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 RANBP17Q9H2T7 1088 aaKnown RBP17.19■□□□□ 0.34
CACFD1-202ENST00000316948 EHMT1Q9H9B1 1298 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 RAB20Q9NX57 234 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 TMX2Q9Y320 296 aa17.19■□□□□ 0.34
CACFD1-202ENST00000316948 MAP3K7O43318 606 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 TJP3O95049 919 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 UNGP13051 313 aaPredicted RBP17.18■□□□□ 0.34
CACFD1-202ENST00000316948 ARFIP2P53365 341 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 SLC18A1P54219 525 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 ZRSR2Q15696 482 aaKnown RBP17.18■□□□□ 0.34
CACFD1-202ENST00000316948 KBTBD2Q8IY47 623 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 PTCD3Q96EY7 689 aaKnown RBP17.18■□□□□ 0.34
CACFD1-202ENST00000316948 GBP5Q96PP8 586 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 TRIM55Q9BYV6 548 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 SYNCQ9H7C4 482 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 COL20A1Q9P218 1284 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 CLRN2A0PK11 232 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 ESRRAP11474 423 aaPredicted RBP17.18■□□□□ 0.34
CACFD1-202ENST00000316948 SSTR1P30872 391 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 PLCB3Q01970 1234 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 CEP128Q6ZU80 1094 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 TTC7BQ86TV6 843 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 FBXL13Q8NEE6 735 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 ZFAND2BQ8WV99 257 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 IFT43Q96FT9 208 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 AGBL1Q96MI9 1066 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 MANSC1Q9H8J5 431 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 ARMCX1Q9P291 453 aa17.18■□□□□ 0.34
CACFD1-202ENST00000316948 LIASO43766 372 aa17.17■□□□□ 0.34
CACFD1-202ENST00000316948 HNRNPCL1O60812 293 aaKnown RBP17.17■□□□□ 0.34
CACFD1-202ENST00000316948 NPM3O75607 178 aaKnown RBP17.17■□□□□ 0.34
CACFD1-202ENST00000316948 P4HBP07237 508 aaKnown RBP17.17■□□□□ 0.34
CACFD1-202ENST00000316948 SPP2Q13103 211 aa17.17■□□□□ 0.34
CACFD1-202ENST00000316948 LAMB3Q13751 1172 aa17.17■□□□□ 0.34
CACFD1-202ENST00000316948 TFDP1Q14186 410 aa17.17■□□□□ 0.34
CACFD1-202ENST00000316948 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms