RNA–Protein interactions for RNA: ENST00000316788.11

AP3S1-201, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AP3S1, Length 1,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-201ENST00000316788 TDRPQ86YL5 185 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 TMEM35BQ8NCS4 154 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 MAGEC3Q8TD91 643 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PCYT2Q99447 389 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 MRPL4Q9BYD3 311 aaKnown RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 FRMD8P1Q9BZ68 369 aaPredicted RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PHACTR1Q9C0D0 580 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 NIF3L1Q9GZT8 377 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 O00370 1275 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 DNALI1O14645 258 aaPredicted RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 FARP2O94887 1054 aaPredicted RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 EDN1P05305 212 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 TGFB3P10600 412 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 UBA1P22314 1058 aaKnown RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PIGHQ14442 188 aaPredicted RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 RASA2Q15283 850 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 CCDC142Q17RM4 750 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PPP1R15BQ5SWA1 713 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 IER5Q5VY09 327 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PPP1R21Q6ZMI0 780 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 PHLDB2Q86SQ0 1253 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 FUKQ8N0W3 1084 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 NKD2Q969F2 451 aaPredicted RBP20.67■□□□□ 0.9
AP3S1-201ENST00000316788 FAXDC2Q96IV6 333 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 CFAP57Q96MR6 1250 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 EFR3BQ9Y2G0 817 aa20.67■□□□□ 0.9
AP3S1-201ENST00000316788 CHUKO15111 745 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 EIF4BP23588 611 aaKnown RBP20.66■□□□□ 0.9
AP3S1-201ENST00000316788 PPARDQ03181 441 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 LLGL1Q15334 1064 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 TRIP13Q15645 432 aaPredicted RBP20.66■□□□□ 0.9
AP3S1-201ENST00000316788 SGSM1Q2NKQ1 1148 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 C2CD6Q53TS8 623 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 ARHGEF18Q6ZSZ5 1173 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 TRPM8Q7Z2W7 1104 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 ANKS1BQ7Z6G8 1248 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 RIOX2Q8IUF8 465 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 ALLCQ8N6M5 410 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 DYDC1Q8WWB3 177 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 TCP11Q8WWU5 503 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 ELAC2Q9BQ52 826 aaKnown RBP20.66■□□□□ 0.9
AP3S1-201ENST00000316788 UBN1Q9NPG3 1134 aa20.66■□□□□ 0.9
AP3S1-201ENST00000316788 CFAP73A6NFT4 308 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 OGTO15294 1046 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 MSCO60682 206 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 CD58P19256 250 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 MAGEA4P43358 317 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 SLC18A1P54219 525 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 YWHAEP62258 255 aaKnown RBP20.65■□□□□ 0.9
AP3S1-201ENST00000316788 TTLL12Q14166 644 aaPredicted RBP20.65■□□□□ 0.9
AP3S1-201ENST00000316788 CCDC38Q502W7 563 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 DNAJC24Q6P3W2 148 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 POLNQ7Z5Q5 900 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 GBP7Q8N8V2 638 aaPredicted RBP20.65■□□□□ 0.9
AP3S1-201ENST00000316788 USTQ9Y2C2 406 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 USP15Q9Y4E8 981 aaPredicted RBP20.65■□□□□ 0.9
AP3S1-201ENST00000316788 A0A0G2JMZ2 1700 aa20.65■□□□□ 0.9
AP3S1-201ENST00000316788 KRT1P04264 644 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 BRAFP15056 766 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 STAT5BP51692 787 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 GTF2A1P52655 376 aaPredicted RBP20.64■□□□□ 0.9
AP3S1-201ENST00000316788 ZNF252P-AS1Q0IIN9 211 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 MORF4L2Q15014 288 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 CYB5D1Q6P9G0 228 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 LBX2Q6XYB7 198 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 SPOCD1Q6ZMY3 1216 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 ANKRD35Q8N283 1001 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 C2orf40Q9H1Z8 148 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 STRIP2Q9ULQ0 834 aa20.64■□□□□ 0.9
AP3S1-201ENST00000316788 SUN1O94901 812 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 ITGAVP06756 1048 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 NF2P35240 595 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 IFNAR2P48551 515 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 MXD4Q14582 209 aaPredicted RBP20.64■□□□□ 0.89
AP3S1-201ENST00000316788 DUOXA2Q1HG44 320 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 GSTA5Q7RTV2 222 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.64■□□□□ 0.897e-7■□□□□ 9.1
AP3S1-201ENST00000316788 SEPT1Q8WYJ6 367 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 GRAMD1AQ96CP6 724 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 CLMNQ96JQ2 1002 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 MAGEB18Q96M61 343 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 RBM15Q96T37 977 aaKnown RBP eCLIP20.64■□□□□ 0.89
AP3S1-201ENST00000316788 ACO2Q99798 780 aaKnown RBP20.64■□□□□ 0.89
AP3S1-201ENST00000316788 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.64■□□□□ 0.89
AP3S1-201ENST00000316788 CPSF3Q9UKF6 684 aaKnown RBP20.64■□□□□ 0.89
AP3S1-201ENST00000316788 SHOC2Q9UQ13 582 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 NAALADL1Q9UQQ1 740 aa20.64■□□□□ 0.89
AP3S1-201ENST00000316788 DOCK5Q9H7D0 1870 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 hCG_1818297A0A087WSY0 165 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 ABLIM1O14639 778 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 MNAT1P51948 309 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 VCPP55072 806 aaKnown RBP20.63■□□□□ 0.89
AP3S1-201ENST00000316788 GSCP56915 257 aaPredicted RBP20.63■□□□□ 0.89
AP3S1-201ENST00000316788 OASLQ15646 514 aaKnown RBP20.63■□□□□ 0.89
AP3S1-201ENST00000316788 P3H1Q32P28 736 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 DAB2IPQ5VWQ8 1189 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 METTL7BQ6UX53 244 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 MFSD7Q6UXD7 560 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 SEPT14Q6ZU15 432 aa20.63■□□□□ 0.89
AP3S1-201ENST00000316788 ZBTB8OSQ8IWT0 167 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms