RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 IMPG2Q9BZV3 1241 aa15.65■□□□□ 0.1
CLK4-201ENST00000316308 NIF3L1Q9GZT8 377 aa15.65■□□□□ 0.1
CLK4-201ENST00000316308 CDT1Q9H211 546 aa15.65■□□□□ 0.1
CLK4-201ENST00000316308 LGR5O75473 907 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 PIAS1O75925 651 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 PROZP22891 400 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 RFC1P35251 1148 aaPredicted RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 MBTD1Q05BQ5 628 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 NFX1Q12986 1120 aaKnown RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 TAF5Q15542 800 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 CLUL1Q15846 466 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 WDR72Q3MJ13 1102 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 ERO1BQ86YB8 467 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 MICALL1Q8N3F8 863 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 SMYD3Q9H7B4 428 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 TBK1Q9UHD2 729 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 AGTPBP1Q9UPW5 1226 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 A0A087WZ62 844 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 RASGRF2O14827 1237 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 BANF1O75531 89 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 CD19P15391 556 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 IREB2P48200 963 aaKnown RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 EIF3BP55884 814 aaKnown RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 GAD2Q05329 585 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 C1QBPQ07021 282 aaKnown RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 TRPC3Q13507 836 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 PTK6Q13882 451 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 KCTD2Q14681 263 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 DPH6Q7L8W6 267 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 EXOC3L1Q86VI1 746 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 KATNAL2Q8IYT4 538 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 C1orf127Q8N9H9 656 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 MGARPQ8TDB4 240 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 ATXN2LQ8WWM7 1075 aaKnown RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 SLCO2A1Q92959 643 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 SNF8Q96H20 258 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 FDXACB1Q9BRP7 624 aaPredicted RBP15.64■□□□□ 0.09
CLK4-201ENST00000316308 PARVAQ9NVD7 372 aa15.64■□□□□ 0.09
CLK4-201ENST00000316308 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.64■□□□□ 0.09
CLK4-201ENST00000316308 SPDYE5A6NIY4 337 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 CD48P09326 243 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 INSRRP14616 1297 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 IL1R2P27930 398 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 MAGEA9P43362 315 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 MMP13P45452 471 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 CDR1P51861 262 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 EFNA5P52803 228 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 DYNLT1P63172 113 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 FASTKD3Q14CZ7 662 aaKnown RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 MPZL3Q6UWV2 235 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 ARFGAP2Q8N6H7 521 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 ATL2Q8NHH9 583 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 PGM2Q96G03 612 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 FAM81BQ96LP2 452 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 SLITRK1Q96PX8 696 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 PRMT1Q99873 361 aaKnown RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 FZD8Q9H461 694 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 DICER1Q9UPY3 1922 aaKnown RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 LACTBL1A8MY62 500 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 ACKR2O00590 384 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 MPP2Q14168 576 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 P3H1Q32P28 736 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 FBXW10Q5XX13 1052 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 DCUN1D2Q6PH85 259 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 CAPN12Q6ZSI9 719 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 TSHZ1Q6ZSZ6 1077 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 ZBTB8OSQ8IWT0 167 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 TRIM11Q96F44 468 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 SCLT1Q96NL6 688 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 XPO6Q96QU8 1125 aaKnown RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 CPXM1Q96SM3 734 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 MRPL47Q9HD33 250 aaKnown RBP15.63■□□□□ 0.09
CLK4-201ENST00000316308 NINJ2Q9NZG7 142 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 WHRNQ9P202 907 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 ANAPC5Q9UJX4 755 aa15.63■□□□□ 0.09
CLK4-201ENST00000316308 PSTPIP1O43586 416 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 KRT1P04264 644 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 ATF2P15336 505 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 YBX3P16989 372 aaKnown RBP eCLIP15.62■□□□□ 0.09
CLK4-201ENST00000316308 KLRC2P26717 231 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 MXD4Q14582 209 aaPredicted RBP15.62■□□□□ 0.09
CLK4-201ENST00000316308 SGSM1Q2NKQ1 1148 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 PPP1R15BQ5SWA1 713 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 ERMARDQ5T6L9 678 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 SH3PXD2AQ5TCZ1 1133 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 JADE1Q6IE81 842 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 DNAJC24Q6P3W2 148 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 HOOK3Q86VS8 718 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 ANKRD13AQ8IZ07 590 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 PIWIL1Q96J94 861 aaKnown RBP15.62■□□□□ 0.09
CLK4-201ENST00000316308 ZWILCHQ9H900 591 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 ATP2C2O75185 946 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 C22orf31O95567 290 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 GH1P01241 217 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 ITGB3P05106 788 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 TNFAIP8L3Q5GJ75 292 aa15.62■□□□□ 0.09
CLK4-201ENST00000316308 RNF187Q5TA31 235 aaPredicted RBP15.62■□□□□ 0.09
CLK4-201ENST00000316308 TRIM72Q6ZMU5 477 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms