RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 MKNK1Q9BUB5 465 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 TIPINQ9BVW5 301 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 UBE2TQ9NPD8 197 aaPredicted RBP18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 ZFATQ9P243 1243 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 CPA4Q9UI42 421 aa18.2■□□□□ 0.5
SCAMP4-201ENST00000316097 MTFR1Q15390 333 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 CCDC62Q6P9F0 684 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 XXYLT1Q8NBI6 393 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 MCPH1Q8NEM0 835 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 CD101Q93033 1021 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 NTPCRQ9BSD7 190 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 NKIRAS1Q9NYS0 192 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 LRRIQ4A6NIV6 560 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 CLDN3O15551 220 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 THAP12O43422 761 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 TTC4O95801 387 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 ITGBL1O95965 494 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 GLRA2P23416 452 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 RNASELQ05823 741 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 TRIP13Q15645 432 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 ARHGEF18Q6ZSZ5 1173 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 LRRC71Q8N4P6 559 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 TMEM237Q96Q45 408 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 PITPNM3Q9BZ71 974 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 MYLK2Q9H1R3 596 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 ST6GALNAC4Q9H4F1 302 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 DHX33Q9H6R0 707 aaKnown RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 TXLNGQ9NUQ3 528 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 ZMYND8Q9ULU4 1186 aaPredicted RBP18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 EMSYQ7Z589 1322 aa18.19■□□□□ 0.5
SCAMP4-201ENST00000316097 A6NHS1 94 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 HNRNPDLO14979 420 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 GJB1P08034 283 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 C1orf220Q5T0J3 134 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 VSIG1Q86XK7 387 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 SLC9A9Q8IVB4 645 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 MAP4K3Q8IVH8 894 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 SPDYE1Q8NFV5 336 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 PARD3BQ8TEW8 1205 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 SLC7A3Q8WY07 619 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 BICD1Q96G01 975 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 PWWP2AQ96N64 755 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 PAIP2Q9BPZ3 127 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 WHRNQ9P202 907 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 TAC1P20366 129 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 FOXN2P32314 431 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 ZNF792Q3KQV3 632 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 SGO2Q562F6 1265 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 ARHGEF19Q8IW93 802 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 ERP27Q96DN0 273 aa18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 ZBTB45Q96K62 511 aaPredicted RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 MYH9P35579 1960 aaKnown RBP18.18■□□□□ 0.5
SCAMP4-201ENST00000316097 EDN1P05305 212 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 TARSP26639 723 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ADCYAP1R1P41586 468 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 VAMP7P51809 220 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 RAD23BP54727 409 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 CCNA1P78396 465 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 STRN3Q13033 797 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 BIRC2Q13490 618 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ALCAMQ13740 583 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 RHBDF2Q6PJF5 856 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 GPR142Q7Z601 462 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ANKRD23Q86SG2 305 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 C12orf50Q8NA57 414 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 POMGNT1Q8WZA1 660 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 PCDHB18PQ96TA0 734 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 MPHOSPH6Q99547 160 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 NIFKQ9BYG3 293 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 LRRC19Q9H756 370 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 RNPEPL1Q9HAU8 725 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 TOPORSQ9NS56 1045 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 IVNS1ABPQ9Y6Y0 642 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 TTLL13PA6NNM8 815 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 CHRNB2P17787 502 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 GNAZP19086 355 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 CCDC15Q0P6D6 951 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ACVR2BQ13705 512 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 SNRNP35Q16560 246 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 DPP9Q86TI2 863 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 SHCBP1Q8NEM2 672 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 LMO3Q8TAP4 145 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ZNF564Q8TBZ8 553 aaPredicted RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 PPP1R13LQ8WUF5 828 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 SPIRE2Q8WWL2 714 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 SH3GL3Q99963 347 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 NUP85Q9BW27 656 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 NRBP2Q9NSY0 501 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 BRCA2P51587 3418 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 ZNFX1Q9P2E3 1918 aaKnown RBP18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 LOXHD1Q8IVV2 1947 aa18.17■□□□□ 0.5
SCAMP4-201ENST00000316097 PEX11AO75192 247 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 VPS41P49754 854 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 ZNF157P51786 506 aaPredicted RBP18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 ITGA8P53708 1063 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 RWDD2BP57060 319 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 FKBP1BP68106 108 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 TAPT1Q6NXT6 567 aa18.16■□□□□ 0.5
SCAMP4-201ENST00000316097 ATG4AQ8WYN0 398 aa18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms