RNA–Protein interactions for RNA: ENST00000315684.12

CTC1-201, Transcript of CST telomere replication complex component 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTC1, Length 7,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-201ENST00000315684 PPP3CCP48454 512 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 GRB10Q13322 594 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 METTL16Q86W50 562 aaKnown RBP9.47□□□□□ -0.89
CTC1-201ENST00000315684 RHOT2Q8IXI1 618 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 KCTD17Q8N5Z5 321 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 MYOCQ99972 504 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 PCDHB5Q9Y5E4 795 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 PCDHB2Q9Y5E7 798 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 FHOD1Q9Y613 1164 aa9.47□□□□□ -0.89
CTC1-201ENST00000315684 SPDYE5A6NIY4 337 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 MAPK13O15264 365 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 MT-ND3P03897 115 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 MAPRE1Q15691 268 aaKnown RBP9.46□□□□□ -0.89
CTC1-201ENST00000315684 FKBP1CQ5VVH2 108 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 ILDR2Q71H61 639 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 B4GALNT4Q76KP1 1039 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 RDM1Q8NG50 284 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 TMEM8AQ9HCN3 771 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 PYCARDQ9ULZ3 195 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 LIG3P49916 1009 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 POLD3Q15054 466 aaPredicted RBP9.46□□□□□ -0.89
CTC1-201ENST00000315684 KIF19Q2TAC6 998 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 IL31RAQ8NI17 732 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 AGPAT3Q9NRZ7 376 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 GPATCH2LQ9NWQ4 482 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 SNCAIPQ9Y6H5 919 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 TUBB4AP04350 444 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 KRT7P08729 469 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 KITP10721 976 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 CYP2C18P33260 490 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 STARD3Q14849 445 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 FBXO47Q5MNV8 452 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 KRT222Q8N1A0 295 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 TRPV6Q9H1D0 765 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 BTBD7Q9P203 1132 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 STK38LQ9Y2H1 464 aa9.46□□□□□ -0.89
CTC1-201ENST00000315684 ZBTB48P10074 688 aaPredicted RBP9.46□□□□□ -0.9
CTC1-201ENST00000315684 FXR2P51116 673 aaKnown RBP eCLIP9.46□□□□□ -0.9
CTC1-201ENST00000315684 PLCL1Q15111 1095 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 FAM110CQ1W6H9 321 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 CRY2Q49AN0 593 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 ANKMY2Q8IV38 441 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 ING5Q8WYH8 240 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 MRPL9Q9BYD2 267 aaKnown RBP9.46□□□□□ -0.9
CTC1-201ENST00000315684 TRIM10Q9UDY6 481 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 SNX24Q9Y343 169 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 EXOC1LA0A1B0GW35 172 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 SART1O43290 800 aaKnown RBP9.46□□□□□ -0.9
CTC1-201ENST00000315684 CA12O43570 354 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 PMPCBO75439 489 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 SLC26A2P50443 739 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 OAZ1P54368 228 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 SLC27A1Q6PCB7 646 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 DOK6Q6PKX4 331 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 TMCO5AQ8N6Q1 288 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 GTSE1Q9NYZ3 720 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 NRCAMQ92823 1304 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 SOCS7O14512 581 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 VSTM4Q8IW00 320 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 MAGEB5Q9BZ81 275 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 CCSER1Q9C0I3 900 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 ABHD10Q9NUJ1 306 aa9.46□□□□□ -0.9
CTC1-201ENST00000315684 MTHFD1LQ6UB35 978 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 ENOSF1Q7L5Y1 443 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 PDIK1LQ8N165 341 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 RAB42Q8N4Z0 105 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 VPS39Q96JC1 886 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 C7orf25Q9BPX7 421 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 CATSPERBQ9H7T0 1116 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 HPS4Q9NQG7 708 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 EML1O00423 815 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 TROVE2P10155 538 aaKnown RBP eCLIP9.45□□□□□ -0.9
CTC1-201ENST00000315684 EPB42P16452 691 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 TKTL1P51854 596 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 NOMO2Q5JPE7 1267 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 ZBTB41Q5SVQ8 909 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 RIOX1Q9H6W3 641 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 CASS4Q9NQ75 786 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 TLR8Q9NR97 1041 aaKnown RBP9.45□□□□□ -0.9
CTC1-201ENST00000315684 SLC13A4Q9UKG4 626 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 PTCH2Q9Y6C5 1203 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 MROH1Q8NDA8 1641 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 TREHO43280 583 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 MFAP3LO75121 409 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 NCF2P19878 526 aaPredicted RBP9.45□□□□□ -0.9
CTC1-201ENST00000315684 ARHGAP18Q8N392 663 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 VGLL2Q8N8G2 317 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 SYT15Q9BQS2 421 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 SLC13A1Q9BZW2 595 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 RAB27AP51159 221 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 CENPUQ71F23 418 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 CCNYL1Q8N7R7 359 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 CCHCR1Q8TD31 782 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 LATS2Q9NRM7 1088 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 BAG5Q9UL15 447 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 SLC30A1Q9Y6M5 507 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.45□□□□□ -0.9
CTC1-201ENST00000315684 TXNDC9O14530 226 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 DYNC1I1O14576 645 aa9.45□□□□□ -0.9
CTC1-201ENST00000315684 GSTA4O15217 222 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms