RNA–Protein interactions for RNA: ENST00000315286.12

CCDC43-201, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC43, Length 2,082 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-201ENST00000315286 INHBEP58166 350 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 DHX34Q14147 1143 aaKnown RBP19.49■□□□□ 0.71
CCDC43-201ENST00000315286 TTC27Q6P3X3 843 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 MREGQ8N565 214 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.49■□□□□ 0.71
CCDC43-201ENST00000315286 KIF12Q96FN5 646 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 APBA2Q99767 749 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 EIF2AQ9BY44 585 aaKnown RBP19.49■□□□□ 0.71
CCDC43-201ENST00000315286 TRIM31Q9BZY9 425 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 AP5M1Q9H0R1 490 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.49■□□□□ 0.71
CCDC43-201ENST00000315286 SNTG2Q9NY99 539 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 ITGA11Q9UKX5 1188 aa19.49■□□□□ 0.71
CCDC43-201ENST00000315286 TREHO43280 583 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 PAEPP09466 180 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 DARSP14868 501 aaKnown RBP19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CTGFP29279 349 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 TAS2R40P59535 323 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 RBP5P82980 135 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CRHR2Q13324 411 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CYP1B1Q16678 543 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 ALS2CLQ60I27 953 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 SLC27A1Q6PCB7 646 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 ERICH1Q86X53 443 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 SLC4A11Q8NBS3 891 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 ERP44Q9BS26 406 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 PLVAPQ9BX97 442 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 ELOVL4Q9GZR5 314 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 RAB17Q9H0T7 212 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 MTUS1Q9ULD2 1270 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 USTQ9Y2C2 406 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CEP83Q9Y592 693 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 FAM187AA6NFU0 413 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 TMEM191CA6NGB0 347 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 FSCN2O14926 492 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 RNF40O75150 1001 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CILPO75339 1184 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CCDC137Q6PK04 289 aaKnown RBP19.48■□□□□ 0.71
CCDC43-201ENST00000315286 NT5DC4Q86YG4 428 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 JAMLQ86YT9 394 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CD302Q8IX05 232 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 SOCS4Q8WXH5 440 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 CYP3A43Q9HB55 503 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 FAM114A2Q9NRY5 505 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 PCYOX1Q9UHG3 505 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 ADAM21Q9UKJ8 722 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 HES2Q9Y543 173 aa19.48■□□□□ 0.71
CCDC43-201ENST00000315286 FAM155AB1AL88 458 aaPredicted RBP19.47■□□□□ 0.71
CCDC43-201ENST00000315286 MED7O43513 233 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 HSF2BPO75031 334 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 CYP4A22Q5TCH4 519 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 DUPD1Q68J44 220 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 IQCKQ8N0W5 287 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 TMEM40Q8WWA1 233 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 ZMAT2Q96NC0 199 aaKnown RBP19.47■□□□□ 0.71
CCDC43-201ENST00000315286 LHX5Q9H2C1 402 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 IP6K2Q9UHH9 426 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 CYTH4Q9UIA0 394 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 Q9Y3F1 56 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 SCN1AP35498 2009 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 P4HA1P13674 534 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 HSPA9P38646 679 aaKnown RBP19.47■□□□□ 0.71
CCDC43-201ENST00000315286 PTPN11Q06124 597 aaPredicted RBP19.47■□□□□ 0.71
CCDC43-201ENST00000315286 DNAJC24Q6P3W2 148 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 NOTUMQ6P988 496 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 RHOT1Q8IXI2 618 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 PIK3R5Q8WYR1 880 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 TMEM176AQ96HP8 235 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 ZIM3Q96PE6 472 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 MCEEQ96PE7 176 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 HERPUD2Q9BSE4 406 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 PLEKHA5Q9HAU0 1116 aa19.47■□□□□ 0.71
CCDC43-201ENST00000315286 PSTPIP1O43586 416 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 MAN1A1P33908 653 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 FLT3P36888 993 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 COILP38432 576 aaPredicted RBP19.46■□□□□ 0.71
CCDC43-201ENST00000315286 ZNF252P-AS1Q0IIN9 211 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 FSCN1Q16658 493 aaKnown RBP19.46■□□□□ 0.71
CCDC43-201ENST00000315286 PTPN20Q4JDL3 420 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 PPP1R15BQ5SWA1 713 aa19.46■□□□□ 0.71
CCDC43-201ENST00000315286 APBB1IPQ7Z5R6 666 aaPredicted RBP19.46■□□□□ 0.71
CCDC43-201ENST00000315286 STAU1O95793 577 aaKnown RBP19.45■□□□□ 0.7
CCDC43-201ENST00000315286 SSR1P43307 286 aaKnown RBP19.45■□□□□ 0.7
CCDC43-201ENST00000315286 KCNJ1P48048 391 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 OGDHQ02218 1023 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 CFAP58Q5T655 872 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 DCUN1D2Q6PH85 259 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 SNX27Q96L92 541 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 SH3GL2Q99962 352 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 TJP2Q9UDY2 1190 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 SNX17Q15036 470 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 PCBP1Q15365 356 aaKnown RBP eCLIP19.45■□□□□ 0.7
CCDC43-201ENST00000315286 C12orf50Q8NA57 414 aaPredicted RBP19.45■□□□□ 0.7
CCDC43-201ENST00000315286 C3orf20Q8ND61 904 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 TRPV1Q8NER1 839 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 ZIC5Q96T25 663 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 NXF3Q9H4D5 531 aaKnown RBP19.45■□□□□ 0.7
CCDC43-201ENST00000315286 LRRC19Q9H756 370 aa19.45■□□□□ 0.7
CCDC43-201ENST00000315286 SNX24Q9Y343 169 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms