RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 TAS1R2Q8TE23 839 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 MANSC1Q9H8J5 431 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 RASSF10A6NK89 507 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 AP3B1O00203 1094 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 CYTH3O43739 400 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 BMP6P22004 513 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 RRM1P23921 792 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 CTCFP49711 727 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 MYBPC2Q14324 1141 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 SEZ6Q53EL9 994 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 LRRC23Q53EV4 343 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 NDUFAF2Q8N183 169 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 SPON2Q9BUD6 331 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 TMX2Q9Y320 296 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 UBA6A0AVT1 1052 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 E2F6O75461 281 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 RARBP10826 455 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 KRT4P19013 534 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 GARTP22102 1010 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 EEF1DP29692 281 aaKnown RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 SHMT1P34896 483 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 BTNL9Q6UXG8 535 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 CEP70Q8NHQ1 597 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 HDAC7Q8WUI4 952 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 HPDLQ96IR7 371 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 ZSCAN5CA6NGD5 496 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 F8W8V4 182 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 HBP1O60381 514 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 GH1P01241 217 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 TMED1Q13445 227 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 PDCD2Q16342 344 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 TTC39BQ5VTQ0 682 aaPredicted RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 AGBL3Q8NEM8 1001 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 TMC2Q8TDI7 906 aa14.42□□□□□ -0.1
SPAST-201ENST00000315285 POP1Q99575 1024 aaKnown RBP14.42□□□□□ -0.1
SPAST-201ENST00000315285 STAU2Q9NUL3 570 aaKnown RBP eCLIP14.42□□□□□ -0.1
SPAST-201ENST00000315285 E5RI56 91 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 UGP2Q16851 508 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 CDR2LQ86X02 465 aaPredicted RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 PPHLN1Q8NEY8 458 aaKnown RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 ULK4Q96C45 1275 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 PPP1R36Q96LQ0 422 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 FRMD8Q9BZ67 464 aaPredicted RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 ING2Q9H160 280 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 CDC42EP4Q9H3Q1 356 aaKnown RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 BCL9O00512 1426 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 DCCP43146 1447 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 NEMP1O14524 444 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 ITGA4P13612 1032 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 PTENP60484 403 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 KDELC2Q7Z4H8 507 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 SLC47A2Q86VL8 602 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 ZNF507Q8TCN5 953 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 OLFM3Q96PB7 478 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 ERAP1Q9NZ08 941 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 GGA3Q9NZ52 723 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 MST1RQ04912 1400 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 CCDC78A2IDD5 438 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 B2RBV5 119 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 EEF2KO00418 725 aaKnown RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 STIP1P31948 543 aaKnown RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 BOLA3Q53S33 107 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 DDIASQ8IXT1 998 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 E2F7Q96AV8 911 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 MTBPQ96DY7 904 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 MAP3K20Q9NYL2 800 aaKnown RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 OGTO15294 1046 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 TCF7P36402 384 aaPredicted RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 COL9A3Q14050 684 aaPredicted RBP14.41□□□□□ -0.1
SPAST-201ENST00000315285 PDK1Q15118 436 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 URGCPQ8TCY9 931 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 PARD3BQ8TEW8 1205 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 KRT35Q92764 455 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 STAMBPL1Q96FJ0 436 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 THTPAQ9BU02 230 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 BATF3Q9NR55 127 aa14.41□□□□□ -0.1
SPAST-201ENST00000315285 ITGB3P05106 788 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SPRP35270 261 aaPredicted RBP14.4□□□□□ -0.1
SPAST-201ENST00000315285 ZNF235Q14590 738 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 GOLGA7BQ2TAP0 167 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 C11orf63Q6NUN7 778 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SLC35C1Q96A29 364 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 EML4Q9HC35 981 aaKnown RBP14.4□□□□□ -0.1
SPAST-201ENST00000315285 INTS13Q9NVM9 706 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 GRID1Q9ULK0 1009 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 ZBBXA8MT70 800 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 TRIM49D1C9J1S8 452 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 CSPG5O95196 566 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 CD4P01730 458 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 ACADSBP45954 432 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 GMPSP49915 693 aaPredicted RBP14.4□□□□□ -0.1
SPAST-201ENST00000315285 USP10Q14694 798 aaKnown RBP14.4□□□□□ -0.1
SPAST-201ENST00000315285 SCFD2Q8WU76 684 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 SLC8A2Q9UPR5 921 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 PJA2O43164 708 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 ITIH4Q14624 930 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 LRRC8EQ6NSJ5 796 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 C4orf22Q6V702 233 aa14.4□□□□□ -0.1
SPAST-201ENST00000315285 CYP2W1Q8TAV3 490 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms