RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 GKAP1Q5VSY0 366 aaPredicted RBP14.4□□□□□ -0.1
DDX54-202ENST00000314045 FOXR2Q6PJQ5 311 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 CDKL3Q8IVW4 592 aaPredicted RBP14.4□□□□□ -0.1
DDX54-202ENST00000314045 KIAA0319LQ8IZA0 1049 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ZNF710Q8N1W2 664 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 TMEM176AQ96HP8 235 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ZNF518BQ9C0D4 1074 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 MAF1Q9H063 256 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 BNIP3LO60238 219 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ZNF862O60290 1169 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 PHF2O75151 1096 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 CDH8P55286 799 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 AP1B1Q10567 949 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ZSCAN26Q16670 478 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ELMSAN1Q6PJG2 1045 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 CACNA2D3Q8IZS8 1091 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 VPS52Q8N1B4 723 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 SPON2Q9BUD6 331 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ITGA11Q9UKX5 1188 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 CST8O60676 142 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ODC1P11926 461 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 NR1D1P20393 614 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 FLT3LGP49771 235 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 PMS2P54278 862 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 SH3D19Q5HYK7 790 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 AFAP1L2Q8N4X5 818 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 LRRC8CQ8TDW0 803 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 SNF8Q96H20 258 aa14.4□□□□□ -0.1
DDX54-202ENST00000314045 ACO1P21399 889 aaKnown RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 XPAP23025 273 aaPredicted RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 NCKAP1LP55160 1127 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 TPI1P60174 286 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 PTENP60484 403 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 IL9RQ01113 521 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 MKRN4PQ13434 485 aaPredicted RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 LENG9Q96B70 501 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 SHISA4Q96DD7 197 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 RILPQ96NA2 401 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 ZSWIM1Q9BR11 485 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 PLCD4Q9BRC7 762 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 TNFSF13BQ9Y275 285 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 F5H423 210 aaPredicted RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 ICAM3P32942 547 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 EPHB1P54762 984 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 RAPH1Q70E73 1250 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 PID1Q7Z2X4 250 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 KIF9Q9HAQ2 790 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX54-202ENST00000314045 KLHL14Q9P2G3 628 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 MAPK13O15264 365 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 AP1G2O75843 785 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 SMIM10L2AP0DMW4 78 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 SMIM10L2BP0DMW5 78 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 AXLP30530 894 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 THOC5Q13769 683 aaKnown RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 MGAT5BQ3V5L5 792 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 JADE1Q6IE81 842 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 EFCAB13Q8IY85 973 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 ADGRF2Q8IZF7 708 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 PLEKHA5Q9HAU0 1116 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 FBXL5Q9UKA1 691 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 VIRMAQ69YN4 1812 aaKnown RBP14.39□□□□□ -0.11
DDX54-202ENST00000314045 C10orf71Q711Q0 1435 aa14.39□□□□□ -0.11
DDX54-202ENST00000314045 HMGB1P1B2RPK0 211 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 RAD51CO43502 376 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ARHGAP25P42331 645 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 MAPRE1Q15691 268 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 BOLA3Q53S33 107 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 CCNI2Q6ZMN8 369 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 ELMOD1Q8N336 334 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 SEPT5Q99719 369 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 CDT1Q9H211 546 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ABI2Q9NYB9 513 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 RGS17Q9UGC6 210 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 RECQL4O94761 1208 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 CA4P22748 312 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 CLEC16AQ2KHT3 1053 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 EEF1DP3Q658K8 133 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 SLC13A5Q86YT5 568 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 SLC7A14Q8TBB6 771 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 PPP4R1Q8TF05 950 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ZNF112Q9UJU3 913 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 BARX2Q9UMQ3 279 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 ITGB4P16144 1822 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 CASTOR2A6NHX0 329 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 RBP3P10745 1247 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 SERPINB6P35237 376 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 GGCXP38435 758 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 PAPD7Q5XG87 772 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 SEPT8Q92599 483 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 COLEC11Q9BWP8 271 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 MTIF3Q9H2K0 278 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 TMEM88BA6NKF7 163 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ZBTB24O43167 697 aaPredicted RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 POMCP01189 267 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 PRLRP16471 622 aa14.38□□□□□ -0.11
DDX54-202ENST00000314045 ALDH7A1P49419 539 aaKnown RBP14.38□□□□□ -0.11
DDX54-202ENST00000314045 ZNF131P52739 623 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms