RNA–Protein interactions for RNA: ENST00000309934.4

SEC22A-201, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22A, Length 4,228 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-201ENST00000309934 EGFRP00533 1210 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 COL6A1P12109 1028 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PMS1P54277 932 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 ECM1Q16610 540 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM270Q6UE05 265 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TAOK1Q7L7X3 1001 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 DCP1BQ8IZD4 617 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 ZNF564Q8TBZ8 553 aaPredicted RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 FBXL18Q96ME1 805 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 CARD9Q9H257 536 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 GANQ9H2C0 597 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 LRRC4Q9HBW1 653 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PRKAG2Q9UGJ0 569 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 SNX12Q9UMY4 172 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TSC22D4Q9Y3Q8 395 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 CCDC160A6NGH7 325 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 A6NJR5 290 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 LRRN2O75325 713 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PYGLP06737 847 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 MSL3P1P0C860 447 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 RPL9P32969 192 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TAF12Q16514 161 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 PAPD7Q5XG87 772 aaKnown RBP6.34□□□□□ -1.39
SEC22A-201ENST00000309934 GLB1LQ6UWU2 654 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 REXO1L1PQ8IX06 675 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 RCOR2Q8IZ40 523 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 FAM81AQ8TBF8 368 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 NSMCE1Q8WV22 266 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 APBB2Q92870 758 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 CBWD1Q9BRT8 395 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 DRC3Q9H069 523 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TMEM117Q9H0C3 514 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 XPNPEP3Q9NQH7 507 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 DPP3Q9NY33 737 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 NAGPAQ9UK23 515 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 ZNF711Q9Y462 761 aa6.34□□□□□ -1.39
SEC22A-201ENST00000309934 TCHHQ07283 1943 aa6.34□□□□□ -1.4
SEC22A-201ENST00000309934 H7C4K7 107 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 NPTXRO95502 500 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 STAU1O95793 577 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FTLP02792 175 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SLC9A1P19634 815 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ABCB4P21439 1286 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 BLVRAP53004 296 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 EIF3BP55884 814 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 MRPS6P82932 125 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 COG7P83436 770 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ACTN3Q08043 901 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CAPSQ13938 189 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 EPC2Q52LR7 807 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 RASIP1Q5U651 963 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 C4orf50Q6ZRC1 276 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SLC51AQ86UW1 340 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SESTD1Q86VW0 696 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SIX6OS1Q8N1H7 587 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 C3orf20Q8ND61 904 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 C1orf131Q8NDD1 294 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SEPT8Q92599 483 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CAPZA3Q96KX2 299 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FRMD8Q9BZ67 464 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 RHBDL2Q9NX52 303 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SPATA7Q9P0W8 599 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 RPS6KL1Q9Y6S9 549 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 NCANO14594 1321 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CFAP69A5D8W1 941 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 LUC7L3O95232 432 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SMIM10L2AP0DMW4 78 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SMIM10L2BP0DMW5 78 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ACTN1P12814 892 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 EIF4BP23588 611 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ADCYAP1R1P41586 468 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 TM4SF4P48230 202 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 CENPCQ03188 943 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ARHGAP1Q07960 439 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 KRT81Q14533 505 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SNX17Q15036 470 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ZACNQ401N2 412 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 EFHC1Q5JVL4 640 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 LGSNQ5TDP6 509 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ALS2CLQ60I27 953 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 RAD9BQ6WBX8 426 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 SV2AQ7L0J3 742 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 PARP9Q8IXQ6 854 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FLCNQ8NFG4 579 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ASAP3Q8TDY4 903 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 EZH1Q92800 747 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 HPDLQ96IR7 371 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ARPC5LQ9BPX5 153 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 PHACTR1Q9C0D0 580 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 BATF3Q9NR55 127 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 AGPAT5Q9NUQ2 364 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 NXF1Q9UBU9 619 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 TMA7Q9Y2S6 64 aaKnown RBP6.33□□□□□ -1.4
SEC22A-201ENST00000309934 GIT1Q9Y2X7 761 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 COBLO75128 1261 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 MOCS3O95396 460 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 ODC1P11926 461 aa6.33□□□□□ -1.4
SEC22A-201ENST00000309934 HNRNPH1P31943 449 aaKnown RBP6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms