RNA–Protein interactions for RNA: ENST00000309784.8

TRIM59-201, Transcript of tripartite motif containing 59, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM59, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-201ENST00000309784 ZNF662Q6ZS27 426 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 HINFPQ9BQA5 517 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 TUBB2BQ9BVA1 445 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-201ENST00000309784 BARX2Q9UMQ3 279 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-201ENST00000309784 SNX12Q9UMY4 172 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 UPP2O95045 317 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 RGS7P49802 495 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 LRRC8DQ7L1W4 858 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 COG1Q8WTW3 980 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 L2HGDHQ9H9P8 463 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 CYP3A43Q9HB55 503 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 CNTN3Q9P232 1028 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 GTF3C4Q9UKN8 822 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 MEFVO15553 781 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-201ENST00000309784 GNL1P36915 607 aaPredicted RBP11.82□□□□□ -0.52
TRIM59-201ENST00000309784 RAB27AP51159 221 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 C12orf29Q8N999 325 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 MS4A14Q96JA4 679 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 TWNKQ96RR1 684 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 MRPL45Q9BRJ2 306 aaKnown RBP11.82□□□□□ -0.52
TRIM59-201ENST00000309784 SDCBP2Q9H190 292 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 EPC1Q9H2F5 836 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 DERAQ9Y315 318 aa11.82□□□□□ -0.52
TRIM59-201ENST00000309784 ARL5CA6NH57 179 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 CYB561D2O14569 222 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 GJB6O95452 261 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ACAT1P24752 427 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 HOXC8P31273 242 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 PNPLA4P41247 253 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 AFF1P51825 1210 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 SOX4Q06945 474 aaPredicted RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 CFAP221Q4G0U5 840 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 CCDC50Q8IVM0 306 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 MCOLN2Q8IZK6 566 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 UBL4BQ8N7F7 174 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 TFAP2BQ92481 460 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 SCLYQ96I15 445 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ISCUQ9H1K1 167 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 MRPL47Q9HD33 250 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 SCN10AQ9Y5Y9 1956 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 I3L4J1 428 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 DNM1LO00429 736 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 DYNC1I1O14576 645 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 PSMC1P62191 440 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 POU5F1Q01860 360 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ELOVL4Q9GZR5 314 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 MGEA5O60502 916 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 SELPP16109 830 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 SLC8A3P57103 927 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 MRPS25P82663 173 aaKnown RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 C2orf54Q08AI8 447 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ZNF211Q13398 564 aaPredicted RBP11.81□□□□□ -0.52
TRIM59-201ENST00000309784 OR6B2Q6IFH4 312 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ADGRF2Q8IZF7 708 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 TLR10Q9BXR5 811 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ERVK-5Q9HDB9 667 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 ALG6Q9Y672 507 aa11.81□□□□□ -0.52
TRIM59-201ENST00000309784 PODXLO00592 558 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 KIF4AO95239 1232 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 NOMO3P69849 1222 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 GOLGA7BQ2TAP0 167 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 DENND1BQ6P3S1 775 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 TTC39CQ8N584 583 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 USP38Q8NB14 1042 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 DBF4BQ8NFT6 615 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 DDX1Q92499 740 aaKnown RBP11.8□□□□□ -0.52
TRIM59-201ENST00000309784 CILPO75339 1184 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 CALB1P05937 261 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 SKIP12755 728 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 OR1G1P47890 313 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 CLCNKBP51801 687 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 TERF1P54274 439 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 RAD23BP54727 409 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 SMC1AQ14683 1233 aaKnown RBP11.8□□□□□ -0.52
TRIM59-201ENST00000309784 KLHL7Q8IXQ5 586 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 LRRC52Q8N7C0 313 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 URGCPQ8TCY9 931 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 HIPK3Q9H422 1215 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 ARGLU1Q9NWB6 273 aaPredicted RBP11.8□□□□□ -0.52
TRIM59-201ENST00000309784 TSPAN16Q9UKR8 245 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 GIT1Q9Y2X7 761 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 PCDHGC5Q9Y5F6 944 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 EFCAB8A8MWE9 144 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 HCRTO43612 131 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 VDRP11473 427 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 FAM117BQ6P1L5 589 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 WBP1LQ9NX94 342 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 UVRAGQ9P2Y5 699 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 COG5Q9UP83 839 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 SCINQ9Y6U3 715 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 BRCA2P51587 3418 aa11.8□□□□□ -0.52
TRIM59-201ENST00000309784 A0A0A6YYK5 440 aaPredicted RBP11.79□□□□□ -0.52
TRIM59-201ENST00000309784 COMTP21964 271 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 LBX1P52954 281 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 SEL1L2Q5TEA6 688 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 PAPD7Q5XG87 772 aaKnown RBP11.79□□□□□ -0.52
TRIM59-201ENST00000309784 AGMOQ6ZNB7 445 aa11.79□□□□□ -0.52
TRIM59-201ENST00000309784 SLC4A11Q8NBS3 891 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms