RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 PCSK1NQ9UHG2 260 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 IP6K2Q9UHH9 426 aa12.23□□□□□ -0.45
PTPN2-201ENST00000309660 IGKV6D-21A0A0A0MT36 114 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 VGLL3A8MV65 326 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 MMP8P22894 467 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 SGSM1Q2NKQ1 1148 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 EMC10Q5UCC4 262 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 PLEKHA7Q6IQ23 1121 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 PHF13Q86YI8 300 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 CCDC89Q8N998 374 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 PGM2Q96G03 612 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 ANKRD36BP1Q96IX9 119 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 FAM167AQ96KS9 214 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 MPHOSPH6Q99547 160 aaKnown RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 MINDY3Q9H8M7 445 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 WHRNQ9P202 907 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 GGT7Q9UJ14 662 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 AKT3Q9Y243 479 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 LTBP3Q9NS15 1303 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 RGPD3A6NKT7 1758 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 RGPD4Q7Z3J3 1758 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 PSTPIP1O43586 416 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 OGDHQ02218 1023 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 C1QBPQ07021 282 aaKnown RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 MXD4Q14582 209 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 ZKSCAN8Q15776 578 aaPredicted RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 TCP11Q8WWU5 503 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 ELAC2Q9BQ52 826 aaKnown RBP12.22□□□□□ -0.45
PTPN2-201ENST00000309660 TRAIPQ9BWF2 469 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 EFCC1Q9HA90 598 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 PPP2R3BQ9Y5P8 575 aa12.22□□□□□ -0.45
PTPN2-201ENST00000309660 SGK1O00141 431 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 AGTP01019 485 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 TGFB3P10600 412 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 CYP2C8P10632 490 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 PSMA2P25787 234 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 GPS1Q13098 491 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 PLCB4Q15147 1175 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 DENND1BQ6P3S1 775 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 TAOK1Q7L7X3 1001 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 SRRM1Q8IYB3 904 aaKnown RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 CPB2Q96IY4 423 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 STMN4Q9H169 189 aaPredicted RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 RNPEPQ9H4A4 650 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 RPF1Q9H9Y2 349 aaKnown RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 POC1B-GALNT4F8VUJ3 575 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 MAN1A1P33908 653 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 ARSEP51690 589 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 PTK6Q13882 451 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 CELF3Q5SZQ8 465 aaKnown RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 TRMT10CQ7L0Y3 403 aaKnown RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 LRRC34Q8IZ02 419 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 RBM15Q96T37 977 aaKnown RBP eCLIP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 TMEM121Q9BTD3 319 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 SAYSD1Q9NPB0 183 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 RLFQ13129 1914 aa12.21□□□□□ -0.45
PTPN2-201ENST00000309660 ZNFX1Q9P2E3 1918 aaKnown RBP12.21□□□□□ -0.45
PTPN2-201ENST00000309660 TP73O15350 636 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 TTC4O95801 387 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 VTNP04004 478 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 ITGB3P05106 788 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 CALB1P05937 261 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 NFICP08651 508 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 RFC1P35251 1148 aaPredicted RBP12.21□□□□□ -0.46
PTPN2-201ENST00000309660 PTP4A2Q12974 167 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 CCNG2Q16589 344 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 ZNF667Q5HYK9 610 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 ERMARDQ5T6L9 678 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 MPZL3Q6UWV2 235 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 EXOC3L1Q86VI1 746 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 EXD1Q8NHP7 514 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 KAT2BQ92831 832 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 FAM129AQ9BZQ8 928 aa12.21□□□□□ -0.46
PTPN2-201ENST00000309660 WDR81Q562E7 1941 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TMEM120BA0PK00 339 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TMEM191CA6NGB0 347 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 PIAS1O75925 651 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 EDNRBP24530 442 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 IVDP26440 423 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 PSMC1P62191 440 aaKnown RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 EAPPQ56P03 285 aaPredicted RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 SPDYCQ5MJ68 293 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 SYCP2LQ5T4T6 812 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 KATNAL2Q8IYT4 538 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 RNF19AQ9NV58 838 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 NINJ2Q9NZG7 142 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 RBPJLQ9UBG7 517 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 CPSF3Q9UKF6 684 aaKnown RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 A0A087WZ62 844 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TJP3O95049 919 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 HOXC6P09630 235 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 MMP13P45452 471 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 ZNF252P-AS1Q0IIN9 211 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 KLF1Q13351 362 aaPredicted RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TMED2Q15363 201 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 VCPIP1Q96JH7 1222 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 FDXACB1Q9BRP7 624 aaPredicted RBP12.2□□□□□ -0.46
PTPN2-201ENST00000309660 ADAM7Q9H2U9 754 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 VPS37BQ9H9H4 285 aa12.2□□□□□ -0.46
PTPN2-201ENST00000309660 TMEM51Q9NW97 253 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms