RNA–Protein interactions for RNA: ENST00000301717.8

SPSB3-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-201ENST00000301717 NECTIN4Q96NY8 510 aa19.58■□□□□ 0.72
SPSB3-201ENST00000301717 XYLT2Q9H1B5 865 aa19.58■□□□□ 0.72
SPSB3-201ENST00000301717 TMLHEQ9NVH6 421 aa19.58■□□□□ 0.72
SPSB3-201ENST00000301717 GDAP2Q9NXN4 497 aa19.58■□□□□ 0.72
SPSB3-201ENST00000301717 AFF4Q9UHB7 1163 aaKnown RBP19.58■□□□□ 0.72
SPSB3-201ENST00000301717 R3HCC1Q9Y3T6 440 aaKnown RBP19.58■□□□□ 0.72
SPSB3-201ENST00000301717 CLUHO75153 1309 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 MTMR11A4FU01 709 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 PHACTR2O75167 634 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 PAX3P23760 479 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 VAMP7P51809 220 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 STX17P56962 302 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 CLDN10P78369 228 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 PPP3CAQ08209 521 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 MYO1EQ12965 1108 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 DUSP4Q13115 394 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 EDRF1Q3B7T1 1238 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 CCDC149Q6ZUS6 474 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 RNF135Q8IUD6 432 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 ADGRF2Q8IZF7 708 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 KBTBD7Q8WVZ9 684 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 ZCWPW1Q9H0M4 648 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 CLSTN2Q9H4D0 955 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 WDR6Q9NNW5 1121 aaKnown RBP19.57■□□□□ 0.72
SPSB3-201ENST00000301717 DDX43Q9NXZ2 648 aaKnown RBP19.57■□□□□ 0.72
SPSB3-201ENST00000301717 MUTYHQ9UIF7 546 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 DSEQ9UL01 958 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 CTNND2Q9UQB3 1225 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 INSL5Q9Y5Q6 135 aa19.57■□□□□ 0.72
SPSB3-201ENST00000301717 DOCK6Q96HP0 2047 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 NRG2O14511 850 aaPredicted RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 LRRN2O75325 713 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 CLSTN1O94985 981 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 PAPLNO95428 1278 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 RPL13P26373 211 aaKnown RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 PSMC2P35998 433 aaKnown RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 GCLMP48507 274 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 GPR17Q13304 367 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TRPC3Q13507 836 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TPGS2Q68CL5 300 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 GET4Q7L5D6 327 aaPredicted RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TCEAL8Q8IYN2 117 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 GPT2Q8TD30 523 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TMC2Q8TDI7 906 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 MYADMQ96S97 322 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 MMS19Q96T76 1030 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TSG101Q99816 390 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 EPHX3Q9H6B9 360 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 KIAA1468Q9P260 1216 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 DNMT3BQ9UBC3 853 aaKnown RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 NXF1Q9UBU9 619 aaKnown RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 YIPF1Q9Y548 306 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 NME7Q9Y5B8 376 aa19.56■□□□□ 0.72
SPSB3-201ENST00000301717 MTCL1Q9Y4B5 1905 aaKnown RBP19.56■□□□□ 0.72
SPSB3-201ENST00000301717 TRIOO75962 3097 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 HNRNPA1P09651 372 aaKnown RBP eCLIP19.55■□□□□ 0.72
SPSB3-201ENST00000301717 LMO2P25791 158 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 TWF1Q12792 350 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 NCOA4Q13772 614 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 WDR72Q3MJ13 1102 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 SPOPLQ6IQ16 392 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 SCARA5Q6ZMJ2 495 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 SV2AQ7L0J3 742 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 THEM5Q8N1Q8 247 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 NELFBQ8WX92 580 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 GBP4Q96PP9 640 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 DUSP9Q99956 384 aaKnown RBP19.55■□□□□ 0.72
SPSB3-201ENST00000301717 LPIN3Q9BQK8 851 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 MRPL45Q9BRJ2 306 aaKnown RBP19.55■□□□□ 0.72
SPSB3-201ENST00000301717 CEP72Q9P209 647 aa19.55■□□□□ 0.72
SPSB3-201ENST00000301717 ARHGEF37A1IGU5 675 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 PSMA7O14818 248 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 CETN3O15182 167 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 ATP2C2O75185 946 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 LRG1P02750 347 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 ASGR2P07307 311 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 CCNE1P24864 410 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 HOXA9P31269 272 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 RAP1GAPP47736 663 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 PSMC1P62191 440 aaKnown RBP19.54■□□□□ 0.72
SPSB3-201ENST00000301717 UVSSAQ2YD98 709 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 ZACNQ401N2 412 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 INTS8Q75QN2 995 aaKnown RBP19.54■□□□□ 0.72
SPSB3-201ENST00000301717 LIMS2Q7Z4I7 341 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 ZC3H3Q8IXZ2 948 aaKnown RBP19.54■□□□□ 0.72
SPSB3-201ENST00000301717 TOP6BLQ8N6T0 577 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 TDRD5Q8NAT2 981 aaKnown RBP19.54■□□□□ 0.72
SPSB3-201ENST00000301717 ITFG1Q8TB96 612 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 PI4K2AQ9BTU6 479 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 SMYD3Q9H7B4 428 aa19.54■□□□□ 0.72
SPSB3-201ENST00000301717 MAPK13O15264 365 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 XYLBO75191 536 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 PDGFRBP09619 1106 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 KRT13P13646 458 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 GBP2P32456 591 aaPredicted RBP19.53■□□□□ 0.72
SPSB3-201ENST00000301717 STIM1Q13586 685 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 SLC5A9Q2M3M2 681 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 ZNF699Q32M78 642 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 TTI2Q6NXR4 508 aa19.53■□□□□ 0.72
SPSB3-201ENST00000301717 HS6ST3Q8IZP7 471 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms