RNA–Protein interactions for RNA: ENST00000299366.11

CDH23-202, Transcript of cadherin related 23, humanhuman

TSL 5 BASIC

Gene CDH23, Length 3,954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-202ENST00000299366 AP1ARQ63HQ0 302 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 NAIF1Q69YI7 327 aaPredicted RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 CAPRIN2Q6IMN6 1127 aaKnown RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 HACE1Q8IYU2 909 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 IL31RAQ8NI17 732 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 ACTL9Q8TC94 416 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 PRPF31Q8WWY3 499 aaKnown RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 PRCCQ92733 491 aaPredicted RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 STAMBPL1Q96FJ0 436 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 TSC22D3Q99576 134 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 SARS2Q9NP81 518 aaKnown RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 STOML1Q9UBI4 398 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 DCDC2CA8MYV0 355 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 TRIM49D1C9J1S8 452 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 CCDC117Q8IWD4 279 aaPredicted RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 NETO2Q8NC67 525 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 ALG3Q92685 438 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 CAVIN3Q969G5 261 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 FAM193BQ96PV7 902 aaPredicted RBP15.54■□□□□ 0.08
CDH23-202ENST00000299366 MYOZ2Q9NPC6 264 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 LRRC4BQ9NT99 713 aa15.54■□□□□ 0.08
CDH23-202ENST00000299366 PAN2Q504Q3 1202 aaKnown RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 ENOSF1Q7L5Y1 443 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 MYL3P08590 195 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 HOXA7P31268 230 aaPredicted RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 CCNA1P78396 465 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 OTUD4Q01804 1114 aaKnown RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 CUL2Q13617 745 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 CUL3Q13618 768 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 MSL3Q8N5Y2 521 aaKnown RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 SYTL5Q8TDW5 730 aaPredicted RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 SEPT1Q8WYJ6 367 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 SH3GL2Q99962 352 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 TRIM56Q9BRZ2 755 aaKnown RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 CYP26B1Q9NR63 512 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 FAM8A1Q9UBU6 413 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 NR2E1Q9Y466 385 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 ARSHQ5FYA8 562 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 FUKQ8N0W3 1084 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 LNX1Q8TBB1 728 aaPredicted RBP15.53■□□□□ 0.08
CDH23-202ENST00000299366 LRGUKQ96M69 825 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 SPC25Q9HBM1 224 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 NAALADL1Q9UQQ1 740 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 TRAF3IP3Q9Y228 551 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 MYH10P35580 1976 aa15.53■□□□□ 0.08
CDH23-202ENST00000299366 PEX10O60683 326 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 OATP04181 439 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 IL1R1P14778 569 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 EEF1B2P24534 225 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 TCF7P36402 384 aaPredicted RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 IREB2P48200 963 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 SKOR1P84550 965 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 PRPSAP1Q14558 356 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 FASTKD1Q53R41 847 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 KRT80Q6KB66 452 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 EFCAB12Q6NXP0 572 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 TRIM42Q8IWZ5 723 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 ALKBH8Q96BT7 664 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 MRPL46Q9H2W6 279 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 PIN4Q9Y237 131 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 BANF1O75531 89 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 UBTFL6P0CB48 400 aaPredicted RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 RARGP13631 454 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 PTENP60484 403 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 CNTN2Q02246 1040 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 BIRC2Q13490 618 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 SURF1Q15526 300 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 RCOR2Q8IZ40 523 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 RBM46Q8TBY0 533 aaKnown RBP15.52■□□□□ 0.08
CDH23-202ENST00000299366 PDCD2LQ9BRP1 358 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 WDR18Q9BV38 432 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 AP5M1Q9H0R1 490 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 PHTF1Q9UMS5 762 aa15.52■□□□□ 0.08
CDH23-202ENST00000299366 IGSF9BQ9UPX0 1349 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 DYNC1LI2O43237 492 aaPredicted RBP15.52■□□□□ 0.07
CDH23-202ENST00000299366 SHOX2O60902 331 aaPredicted RBP15.52■□□□□ 0.07
CDH23-202ENST00000299366 SLC1A1P43005 524 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 COPS2P61201 443 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 DCAF6Q58WW2 860 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 CEP70Q8NHQ1 597 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 RNF139Q8WU17 664 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 HEY2Q9UBP5 337 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 MYH8P13535 1937 aa15.52■□□□□ 0.07
CDH23-202ENST00000299366 ZBBXA8MT70 800 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 PMLP29590 882 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 LAYNQ6UX15 382 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 ARMCX2Q7L311 632 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 IFNEQ86WN2 208 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 FBXO36Q8NEA4 188 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 PSMC3IPQ9P2W1 217 aaPredicted RBP15.51■□□□□ 0.07
CDH23-202ENST00000299366 FAM198AQ9UFP1 575 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 HACL1Q9UJ83 578 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 SPDYE2BA6NHP3 402 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 ATP9AO75110 1047 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 FSBPO95073 299 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 MT-CO1P00395 513 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 ICAM1P05362 532 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 SPDYE6P0CI01 402 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 OSBPP22059 807 aa15.51■□□□□ 0.07
CDH23-202ENST00000299366 ZNF200P98182 395 aaPredicted RBP15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms