RNA–Protein interactions for RNA: ENST00000298537.11

SDCCAG3-201, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best) BASIC

Gene SDCCAG3, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-201ENST00000298537 HCRTO43612 131 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 HEXIM1O94992 359 aaKnown RBP27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 MYBL1P10243 752 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 YARSP54577 528 aaKnown RBP27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 HTRA3P83110 453 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 PLEKHA7Q6IQ23 1121 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 SESTD1Q86VW0 696 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 IPPQ9Y573 584 aa27.25■■□□□ 1.95
SDCCAG3-201ENST00000298537 CTNNA1P35221 906 aaKnown RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 NDST1P52848 882 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 SOX4Q06945 474 aaPredicted RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 PLEKHA5Q9HAU0 1116 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 MIF4GDA9UHW6 222 aaKnown RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 ERLIN1O75477 346 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 CHRNA1P02708 482 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 IGFBP6P24592 240 aaPredicted RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 MRPS6P82932 125 aaKnown RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 GUCY2DQ02846 1103 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 PTPN11Q06124 597 aaPredicted RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 C1QBPQ07021 282 aaKnown RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 TMEM176AQ96HP8 235 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 LPIN3Q9BQK8 851 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 MRPL45Q9BRJ2 306 aaKnown RBP27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 CNTN3Q9P232 1028 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 AMACRQ9UHK6 382 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 PCDHGC3Q9UN70 934 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 SNX9Q9Y5X1 595 aa27.24■■□□□ 1.95
SDCCAG3-201ENST00000298537 SMIM28A0A1B0GU29 152 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 SART1O43290 800 aaKnown RBP27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TNNC1P63316 161 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 PTPN20Q4JDL3 420 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 LIN9Q5TKA1 542 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 NME8Q8N427 588 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 UBL4BQ8N7F7 174 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 C12orf29Q8N999 325 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TRIM11Q96F44 468 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 WNT8AQ9H1J5 351 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 SPC25Q9HBM1 224 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 EPB41L5Q9HCM4 733 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 CACNG4Q9UBN1 327 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 PCDHA3Q9Y5H8 950 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 MYO1FO00160 1098 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TCF4P15884 667 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 CYP3A5P20815 502 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 NFX1Q12986 1120 aaKnown RBP27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TWF2Q6IBS0 349 aaKnown RBP27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 CCDC70Q6NSX1 233 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TAF2Q6P1X5 1199 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 CD302Q8IX05 232 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TMEM35BQ8NCS4 154 aa27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TTC7AQ9ULT0 858 aaPredicted RBP27.23■■□□□ 1.95
SDCCAG3-201ENST00000298537 TLR3O15455 904 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 AXLP30530 894 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 CARSP49589 748 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 YWHAEP62258 255 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 CCSAPQ6IQ19 270 aaPredicted RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 ZFP42Q96MM3 310 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 OGFRQ9NZT2 677 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 TCRBV5S1A1TA0A578 114 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 MAP2K7O14733 419 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 KPNA6O60684 536 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 AFF1P51825 1210 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 TAS2R40P59535 323 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 OGDHQ02218 1023 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 ZNF252P-AS1Q0IIN9 211 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 NT5DC4Q86YG4 428 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 VCPIP1Q96JH7 1222 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 CALR3Q96L12 384 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 HEXIM2Q96MH2 286 aaKnown RBP27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 USTQ9Y2C2 406 aa27.22■■□□□ 1.95
SDCCAG3-201ENST00000298537 SPTLC1O15269 473 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 CDH5P33151 784 aaPredicted RBP27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 PCBP1Q15365 356 aaKnown RBP eCLIP27.21■■□□□ 1.954e-11■■■■□ 24.3
SDCCAG3-201ENST00000298537 KLHDC9Q8NEP7 349 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 UBA3Q8TBC4 463 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 ST3GAL5Q9UNP4 418 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 MICAL2O94851 1124 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 LSM8O95777 96 aaKnown RBP27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 CTNNA2P26232 953 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 C9orf57Q5W0N0 161 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 SERINC5Q86VE9 423 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 CASKIN2Q8WXE0 1202 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 MCEEQ96PE7 176 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 CPXM1Q96SM3 734 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 HERPUD2Q9BSE4 406 aa27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 AGO3Q9H9G7 860 aaKnown RBP27.21■■□□□ 1.95
SDCCAG3-201ENST00000298537 RALGAPA2Q2PPJ7 1873 aa27.2■■□□□ 1.95
SDCCAG3-201ENST00000298537 TUBBP07437 444 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 PAEPP09466 180 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 CASP8Q14790 479 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 ERICH1Q86X53 443 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 FEZF2Q8TBJ5 459 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 ZMYND15Q9H091 742 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 CYP3A43Q9HB55 503 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 CREBZFQ9NS37 354 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 SRRDQ9UH36 339 aa27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 BARX2Q9UMQ3 279 aaPredicted RBP27.2■■□□□ 1.94
SDCCAG3-201ENST00000298537 PIK3R2O00459 728 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 PROSCO94903 275 aa27.19■■□□□ 1.94
SDCCAG3-201ENST00000298537 GLE1Q53GS7 698 aaKnown RBP27.19■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms