RNA–Protein interactions for RNA: ENST00000294008.3

SLX4-201, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SLX4, Length 7,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-201ENST00000294008 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 VWA5AO00534 786 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 SMNDC1O75940 238 aaKnown RBP eCLIP12.96□□□□□ -0.33
SLX4-201ENST00000294008 C4BPBP20851 252 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 GSSP48637 474 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 ZNF177Q13360 481 aaPredicted RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 ALCAMQ13740 583 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 SMU1Q2TAY7 513 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 SNAP47Q5SQN1 464 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 TRMT11Q7Z4G4 463 aaKnown RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 TSPAN17Q96FV3 270 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 MASTLQ96GX5 879 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 TBCDQ9BTW9 1192 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CDYLQ9Y232 598 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 PSMD14O00487 310 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CHUKO15111 745 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.33
SLX4-201ENST00000294008 TCEA3O75764 348 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CMA1P23946 247 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 DGKDQ16760 1214 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 FAM45BPQ6NSW5 357 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 DDI1Q8WTU0 396 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CNPPD1Q9BV87 410 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 PCMTD2Q9NV79 361 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 SYNPO2Q9UMS6 1093 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 ARAP1Q96P48 1450 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L15C9J2P7 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L13C9JLJ4 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L11C9JVI0 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L18D6R9N7 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L22D6RA61 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L17D6RBQ6 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L19D6RCP7 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L20D6RJB6 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 PRMT3O60678 531 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CNPP09543 421 aaKnown RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 SKIV2L2P42285 1042 aaKnown RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L24Q0WX57 530 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 USP17L6PQ6QN14 398 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 BRSK2Q8IWQ3 736 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 KATNAL1Q9BW62 490 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 NLNQ9BYT8 704 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 KCNQ3O43525 872 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 GUCY1B2O75343 617 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 BBOX1O75936 387 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 ITGB6P18564 788 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 GFPT1Q06210 699 aaPredicted RBP12.96□□□□□ -0.33
SLX4-201ENST00000294008 SCRN1Q12765 414 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 DNAJC3Q13217 504 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CLEC16AQ2KHT3 1053 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 RABGAP1LQ5R372 815 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 CCDC185Q8N715 623 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 MDM1Q8TC05 714 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 ERAP1Q9NZ08 941 aa12.96□□□□□ -0.33
SLX4-201ENST00000294008 TRPM2O94759 1503 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 SCAF11Q99590 1463 aaKnown RBP12.96□□□□□ -0.34
SLX4-201ENST00000294008 TAF5Q15542 800 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 PROSER1Q86XN7 944 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 SLC35C2Q9NQQ7 365 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 UBAP1Q9NZ09 502 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 CDK13Q14004 1512 aaKnown RBP12.96□□□□□ -0.34
SLX4-201ENST00000294008 POTEMA6NI47 508 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 PRKCBP05771 671 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 FGFR2P21802 821 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 SERPINB1P30740 379 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 NPY2RP49146 381 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 RNF19BQ6ZMZ0 732 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 USP7Q93009 1102 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 KLK14Q9P0G3 267 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 LNPEPQ9UIQ6 1025 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 HECW1Q76N89 1606 aa12.96□□□□□ -0.34
SLX4-201ENST00000294008 CCDC189A1A4V9 331 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 TPST1O60507 370 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 LBPP18428 481 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 ATP5JP18859 108 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 ANXA11P50995 505 aaKnown RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 HUNKP57058 714 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 CSTF3Q12996 717 aaKnown RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 NCF4Q15080 339 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 C19orf18Q8NEA5 215 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 FAM45AQ8TCE6 357 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 CDC23Q9UJX2 597 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 PLA2G4CQ9UP65 541 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 KIF1CO43896 1103 aaKnown RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 IFNA16P05015 189 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 TBXAS1P24557 533 aaPredicted RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 MAGOHP61326 146 aaKnown RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 EN1Q05925 392 aaPredicted RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 BIKQ13323 160 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 DCAF6Q58WW2 860 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 SLC13A5Q86YT5 568 aaPredicted RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 RHOT2Q8IXI1 618 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 SEPT12Q8IYM1 358 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 XXYLT1Q8NBI6 393 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 SGF29Q96ES7 293 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 ASB14A6NK59 587 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 HNRNPRO43390 633 aaKnown RBP12.95□□□□□ -0.34
SLX4-201ENST00000294008 SH3BGRLO75368 114 aa12.95□□□□□ -0.34
SLX4-201ENST00000294008 NCAM1P13591 858 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms