RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 CINPQ9BW66 212 aaPredicted RBP18.08■□□□□ 0.49
SHANK1-201ENST00000293441 APOL5Q9BWW9 433 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 GPRC5CQ9NQ84 441 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 PIK3C2BO00750 1634 aa18.08■□□□□ 0.49
SHANK1-201ENST00000293441 ATN1P54259 1190 aaPredicted RBP18.08■□□□□ 0.48
SHANK1-201ENST00000293441 BACE1P56817 501 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 TRAPPC11Q7Z392 1133 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 SELENONQ9NZV5 590 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 ABCA9Q8IUA7 1624 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 CLCN3P51790 818 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 ADAM21Q9UKJ8 722 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 AURKCQ9UQB9 309 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 PDIA6Q15084 440 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 ERO1BQ86YB8 467 aa18.08■□□□□ 0.48
SHANK1-201ENST00000293441 C5orf58C9J3I9 102 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 CSE1LP55060 971 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF200P98182 395 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 FEZF2Q8TBJ5 459 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 KRT35Q92764 455 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ABTB1Q969K4 478 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 WDCPQ9H6R7 721 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 PTPRUQ92729 1446 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 DCDC2CA8MYV0 355 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 HLA-DPA1P20036 260 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 RFX5P48382 616 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ATP6V0D2Q8N8Y2 350 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 NOP53Q9NZM5 478 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 B3GAT3O94766 335 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 PATL1Q86TB9 770 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 NUP93Q8N1F7 819 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 DACH2Q96NX9 599 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 OSBPL8Q9BZF1 889 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 UBQLN1Q9UMX0 589 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ITIH6Q6UXX5 1313 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 TCP11X1B4DZS4 312 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 NUMBP49757 651 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 COG1Q8WTW3 980 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 IRX2Q9BZI1 471 aaPredicted RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 DBR1Q9UK59 544 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 SSU72P8A0A1W2PR75 194 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 ENO1P06733 434 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 FXR1P51114 621 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 NFIAQ12857 509 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 NBPF9Q3BBW0 867 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 C1orf131Q8NDD1 294 aaKnown RBP18.07■□□□□ 0.48
SHANK1-201ENST00000293441 HASPINQ8TF76 798 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 RSAD1Q9HA92 442 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 PAK5Q9P286 719 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 TUBE1Q9UJT0 475 aa18.07■□□□□ 0.48
SHANK1-201ENST00000293441 M0QYT0 321 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ZC3H11AO75152 810 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 PPP4CP60510 307 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 NR1I3Q14994 352 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 UGP2Q16851 508 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ARMC6Q6NXE6 501 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 C9orf72Q96LT7 481 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 NDE1Q9NXR1 346 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 PITPNM2Q9BZ72 1349 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 H7C4K7 107 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 GAS2O43903 313 aaKnown RBP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 CST8O60676 142 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 AP1G2O75843 785 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 MYL2P10916 166 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 TMED1Q13445 227 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 TRADDQ15628 312 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 C11orf96Q7Z7L8 435 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF513Q8N8E2 541 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ZDHHC15Q96MV8 337 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 YME1L1Q96TA2 773 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 GBA2Q9HCG7 927 aaPredicted RBP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ITIH2P19823 946 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF484Q5JVG2 852 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 PPP1R2P1Q96PQ5 205 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 MTMR12Q9C0I1 747 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 RGL2O15211 777 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 VCAM1P19320 739 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 SGO1Q5FBB7 561 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 WWP1Q9H0M0 922 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 ETNK1Q9HBU6 452 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.06■□□□□ 0.48
SHANK1-201ENST00000293441 SMARCAL1Q9NZC9 954 aa18.06■□□□□ 0.48
SHANK1-201ENST00000293441 CHRM3P20309 590 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 MAPRE1Q15691 268 aaKnown RBP18.05■□□□□ 0.48
SHANK1-201ENST00000293441 RRAGCQ9HB90 399 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 CDV3Q9UKY7 258 aaKnown RBP18.05■□□□□ 0.48
SHANK1-201ENST00000293441 TAF6LQ9Y6J9 622 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-201ENST00000293441 GTPBP10A4D1E9 387 aaKnown RBP18.05■□□□□ 0.48
SHANK1-201ENST00000293441 DDHD2O94830 711 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF177Q13360 481 aaPredicted RBP18.05■□□□□ 0.48
SHANK1-201ENST00000293441 CUL2Q13617 745 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 ZNF677Q86XU0 584 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 AGPAT3Q9NRZ7 376 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 KRT4P19013 534 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 KDSRQ06136 332 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 C6orf10Q5SRN2 563 aa18.05■□□□□ 0.48
SHANK1-201ENST00000293441 NBPF12Q5TAG4 269 aaPredicted RBP18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms