RNA–Protein interactions for RNA: ENST00000289448.2

HMHB1-201, Transcript of histocompatibility minor HB-1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HMHB1, Length 384 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMHB1-201ENST00000289448 CEP250Q9BV73 2442 aa10.31□□□□□ -0.76
HMHB1-201ENST00000289448 A0A1W2PRU2 124 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 KANSL1LA0AUZ9 987 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PRR23AA6NEV1 266 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 KPNA7A9QM74 516 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TULP1O00294 542 aaPredicted RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 YEATS4O95619 227 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 GARTP22102 1010 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PAX3P23760 479 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 EPHB3P54753 998 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TFAMQ00059 246 aaKnown RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PFKPQ01813 784 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PRKCQQ04759 706 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 VITQ6UXI7 678 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 GAREM2Q75VX8 874 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 DNAJB7Q7Z6W7 309 aaPredicted RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 GPIHBP1Q8IV16 184 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 MAML2Q8IZL2 1156 aaPredicted RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 SYCP3Q8IZU3 236 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 ZSCAN18Q8TBC5 510 aaPredicted RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 SMARCD2Q92925 531 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 DHX58Q96C10 678 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 SHDQ96IW2 340 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 LPIN3Q9BQK8 851 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TRIM9Q9C026 710 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TNMDQ9H2S6 317 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 ZFP14Q9HCL3 533 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PDE11AQ9HCR9 933 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 HEBP1Q9NRV9 189 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TMLHEQ9NVH6 421 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 RBAKQ9NYW8 714 aaPredicted RBP10.3□□□□□ -0.76
HMHB1-201ENST00000289448 SIX4Q9UIU6 781 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 PTPRJQ12913 1337 aa10.3□□□□□ -0.76
HMHB1-201ENST00000289448 TSC2P49815 1807 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 DNAH14Q0VDD8 3507 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 FAM170BA6NMN3 283 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 EXTL3O43909 919 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 CUTAO60888 179 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 F13A1P00488 732 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ITGB3P05106 788 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ZSCAN22P10073 491 aaPredicted RBP10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ATF6P18850 670 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 CASP1P29466 404 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 POLR2BP30876 1174 aaKnown RBP10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ALDH1A3P47895 512 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 FZD5Q13467 585 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ALCAMQ13740 583 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 BECN1Q14457 450 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 UBXN2BQ14CS0 331 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 LMBRD2Q68DH5 695 aaPredicted RBP10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ARMCX5Q6P1M9 558 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 TPRG1Q6ZUI0 275 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 EPM2AIP1Q7L775 607 aaPredicted RBP10.29□□□□□ -0.76
HMHB1-201ENST00000289448 C1orf210Q8IVY1 113 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 CCDC65Q8IXS2 484 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ZNF687Q8N1G0 1237 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 LEMD2Q8NC56 503 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 SPRYD3Q8NCJ5 442 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 PSMG2Q969U7 264 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 ZNF396Q96N95 335 aaPredicted RBP10.29□□□□□ -0.76
HMHB1-201ENST00000289448 LRRC3BQ96PB8 259 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 MKNK1Q9BUB5 465 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 TRPV4Q9HBA0 871 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 LTB4R2Q9NPC1 389 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 DSEQ9UL01 958 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 L1RE1Q9UN81 338 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 AGAP1Q9UPQ3 857 aa10.29□□□□□ -0.76
HMHB1-201ENST00000289448 HEPACAM2A8MVW5 462 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 ARNTLO00327 626 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 POLR2DO15514 142 aaKnown RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 HCRTO43612 131 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 LDHAP00338 332 aaKnown RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 SP9P0CG40 484 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 HAPLN1P10915 354 aaPredicted RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 PSMC3P17980 439 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 TARSP26639 723 aaKnown RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 GDI1P31150 447 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 EHHADHQ08426 723 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 PLD1Q13393 1074 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CCDC142Q17RM4 750 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 MGAT5BQ3V5L5 792 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 SV2CQ496J9 727 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CNNM4Q6P4Q7 775 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 METTL23Q86XA0 190 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 NT5DC4Q86YG4 428 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CBWD2Q8IUF1 395 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 HSCBQ8IWL3 235 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 PDCL2Q8N4E4 241 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CSGALNACT2Q8N6G5 542 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 IQUBQ8NA54 791 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 STKLD1Q8NE28 680 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 OR5B17Q8NGF7 314 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 GIPC2Q8TF65 315 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 NOC3LQ8WTT2 800 aaKnown RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 NKD2Q969F2 451 aaPredicted RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 SEPT5Q99719 369 aaPredicted RBP10.28□□□□□ -0.76
HMHB1-201ENST00000289448 C7orf25Q9BPX7 421 aa10.28□□□□□ -0.76
HMHB1-201ENST00000289448 TRMT61BQ9BVS5 477 aaKnown RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms