RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 SEC14L1Q92503 715 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 TWNKQ96RR1 684 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 HINFPQ9BQA5 517 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 MTG1Q9BT17 334 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ELOVL4Q9GZR5 314 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 NXF3Q9H4D5 531 aaKnown RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ERVK-5Q9HDB9 667 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 LCMT1Q9UIC8 334 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 HPCAL4Q9UM19 191 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ESYT3A0FGR9 886 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PHF2O75151 1096 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 RECQL4O94761 1208 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 C6orf222P0C671 652 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 CARSP49589 748 aaKnown RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 YARSP54577 528 aaKnown RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 GSCP56915 257 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PTPN11Q06124 597 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 UBXN11Q5T124 520 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 TAF2Q6P1X5 1199 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 DENND1BQ6P3S1 775 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 PHLDB2Q86SQ0 1253 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 SLC13A5Q86YT5 568 aaPredicted RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 ZMAT2Q96NC0 199 aaKnown RBP10.81□□□□□ -0.68
C9orf43-201ENST00000288462 CXCL16Q9H2A7 254 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 CEP83Q9Y592 693 aa10.81□□□□□ -0.68
C9orf43-201ENST00000288462 A0A0U1RQG5 324 aaPredicted RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TMEM191CA6NGB0 347 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 H3BQF6 201 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 KIF3CO14782 793 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 PSTPIP1O43586 416 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 CD19P15391 556 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 AARSP49588 968 aaKnown RBP eCLIP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 FLT3LGP49771 235 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TAP1Q03518 808 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 CUL1Q13616 776 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 SIX1Q15475 284 aaPredicted RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 CYP1B1Q16678 543 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 MAATS1Q7Z4T9 603 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 ZDHHC14Q8IZN3 488 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 LRRC52Q8N7C0 313 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 PRELID2Q8N945 189 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 CCDC26Q8TAB7 109 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 FEZF2Q8TBJ5 459 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 DDX27Q96GQ7 796 aaKnown RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TMEM176AQ96HP8 235 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TSPAN18Q96SJ8 248 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 ACBD3Q9H3P7 528 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 ST7Q9NRC1 585 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TUBGCP4Q9UGJ1 667 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 AMACRQ9UHK6 382 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 GTF2IRD1Q9UHL9 959 aa10.8□□□□□ -0.68
C9orf43-201ENST00000288462 BARX2Q9UMQ3 279 aaPredicted RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 PIN4Q9Y237 131 aaKnown RBP10.8□□□□□ -0.68
C9orf43-201ENST00000288462 TLR3O15455 904 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 SEPT4O43236 478 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 OAS2P29728 719 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 ECHS1P30084 290 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 PRKCZQ05513 592 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 ZNF252P-AS1Q0IIN9 211 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 DHX34Q14147 1143 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 PTPN20Q4JDL3 420 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 XKR4Q5GH76 650 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 CYP4F22Q6NT55 531 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 DNAJC24Q6P3W2 148 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 SND1Q7KZF4 910 aaKnown RBP eCLIP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 C12orf50Q8NA57 414 aaPredicted RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 C3orf20Q8ND61 904 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 BEST2Q8NFU1 509 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 PLVAPQ9BX97 442 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 IP6K2Q9UHH9 426 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 CYTH4Q9UIA0 394 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 STRIP2Q9ULQ0 834 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 NFU1Q9UMS0 254 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 HES2Q9Y543 173 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 O00370 1275 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 TTI1O43156 1089 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 ADAMTS4O75173 837 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 GJB6O95452 261 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 VDRP11473 427 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 KCNE1P15382 129 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 CHRNA3P32297 505 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 TAS2R40P59535 323 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 MRPS6P82932 125 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 MYO1EQ12965 1108 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 GPS2Q13227 327 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 ORC1Q13415 861 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 GNASQ5JWF2 1037 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 ERICH1Q86X53 443 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 MREGQ8N565 214 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 GDAP1L1Q96MZ0 367 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 CELF4Q9BZC1 486 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 TRIM6Q9C030 488 aaPredicted RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 PLEKHA4Q9H4M7 779 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 PCYOX1Q9UHG3 505 aa10.79□□□□□ -0.68
C9orf43-201ENST00000288462 UBQLN1Q9UMX0 589 aaKnown RBP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.79□□□□□ -0.68
C9orf43-201ENST00000288462 TCRBV7S2A1N4TA0A589 114 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms