RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 PDE6CP51160 858 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 NDST1P52848 882 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 ZNF394Q53GI3 561 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 NOP9Q86U38 636 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 HASPINQ8TF76 798 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 KBTBD7Q8WVZ9 684 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 EIF3CQ99613 913 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 SYT11Q9BT88 431 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 HCSTQ9UBK5 93 aa20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 NOCTQ9UK39 431 aaKnown RBP20.18■□□□□ 0.82
PDLIM3-202ENST00000284770 F8W810 466 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 LCA5LO95447 670 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 RAD23BP54727 409 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 VPS36Q86VN1 386 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 CMTR2Q8IYT2 770 aaKnown RBP20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 PDCL2Q8N4E4 241 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 FAN1Q9Y2M0 1017 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 PRG3Q9Y2Y8 225 aaPredicted RBP20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 COL4A6Q14031 1691 aa20.17■□□□□ 0.82
PDLIM3-202ENST00000284770 M0QZQ0 153 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 AKR1B10O60218 316 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 GALTP07902 379 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 PAEPP09466 180 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 BRCC3P46736 316 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC11A1P49279 550 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 KIF11P52732 1056 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 NYAP1Q6ZVC0 841 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 UNC93AQ86WB7 457 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ADGRF2Q8IZF7 708 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 TMEM86AQ8N2M4 240 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 OR6B3Q8NGW1 331 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC20A1Q8WUM9 679 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 DDX1Q92499 740 aaKnown RBP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 TMEM176AQ96HP8 235 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SUSD3Q96L08 255 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 TWNKQ96RR1 684 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 AGPAT1Q99943 283 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 COLEC11Q9BWP8 271 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 NT5C1AQ9BXI3 368 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ELOVL4Q9GZR5 314 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 CWH43Q9H720 699 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 HMGXB4Q9UGU5 601 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ADAMTS1Q9UHI8 967 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ZNF263O14978 683 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 GJB5O95377 273 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ODC1P11926 461 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 WARSP23381 471 aaKnown RBP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 GNA15P30679 374 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 GNL1P36915 607 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 BTG3Q14201 252 aaPredicted RBP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 BMS1Q14692 1282 aaKnown RBP20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 WSCD1Q658N2 575 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ZNF677Q86XU0 584 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC4A11Q8NBS3 891 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 OLIG1Q8TAK6 271 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 YME1L1Q96TA2 773 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SNX25Q9H3E2 840 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC4A7Q9Y6M7 1214 aa20.16■□□□□ 0.82
PDLIM3-202ENST00000284770 ARHGEF37A1IGU5 675 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 I3L4J1 428 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 GABRDO14764 452 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 TRAPPC3O43617 180 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 TADA2AO75478 443 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 CALCAP01258 141 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 ALDH7A1P49419 539 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 BCAR1P56945 870 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 CDR2Q01850 454 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC18A3Q16572 532 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 PHOSPHO2Q8TCD6 241 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 SLC9A7Q96T83 725 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 MTIF3Q9H2K0 278 aaKnown RBP20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 ADAM28Q9UKQ2 775 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 DSEQ9UL01 958 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 STXBP5LQ9Y2K9 1186 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 NME7Q9Y5B8 376 aa20.15■□□□□ 0.82
PDLIM3-202ENST00000284770 A0A087X0T9 212 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 A0A0U1RQJ8 604 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 A8MXQ7 604 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 CYP11A1P05108 521 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 FAM228BP0C875 321 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 CHRNB2P17787 502 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 TNFAIP3P21580 790 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 HTRA4P83105 476 aaPredicted RBP20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 GFPT1Q06210 699 aaPredicted RBP20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 TAF3Q5VWG9 929 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 GLYCTKQ8IVS8 523 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 SLC30A5Q8TAD4 765 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 SPATA18Q8TC71 538 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 ATRIPQ8WXE1 791 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 C16orf45Q96MC5 204 aaPredicted RBP20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 MARCH5Q9NX47 278 aa20.14■□□□□ 0.81
PDLIM3-202ENST00000284770 GOLGA6L9A6NEM1 432 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 DDX3XO00571 662 aaKnown RBP eCLIP20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 MMEP08473 750 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 LMO2P25791 158 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 LHX1P48742 406 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 ORC1Q13415 861 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 RASIP1Q5U651 963 aa20.13■□□□□ 0.81
PDLIM3-202ENST00000284770 LNX1Q8TBB1 728 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms