RNA–Protein interactions for RNA: ENST00000283254.11

SCN3A-201, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN3A, Length 9,091 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-201ENST00000283254 AGAP1Q9UPQ3 857 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 SNX24Q9Y343 169 aa4.25□□□□□ -1.73
SCN3A-201ENST00000283254 CAB39Q9Y376 341 aaPredicted RBP4.25□□□□□ -1.73
SCN3A-201ENST00000283254 SETD1BQ9UPS6 1966 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 C17orf102A2RUQ5 167 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SUPT3HB4E1H0 165 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PALMO75781 387 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FKBP9O95302 570 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 AGTP01019 485 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PGK2P07205 417 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RXRGP48443 463 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PKN2Q16513 984 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SNRNP35Q16560 246 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC144BQ3MJ40 725 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FKBP9P1Q75LS8 142 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CYP4Z1Q86W10 505 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HORMAD1Q86X24 394 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PLD3Q8IV08 490 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PASD1Q8IV76 773 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ST13P5Q8NFI4 369 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 OTULINQ96BN8 352 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 REPS1Q96D71 796 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 AGBL1Q96MI9 1066 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SH3GL1Q99961 368 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 OSBPL6Q9BZF3 934 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 UBXN6Q9BZV1 441 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ENTPD7Q9NQZ7 604 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZSWIM5Q9P217 1185 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PCDHB7Q9Y5E2 793 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SAC3D1A6NKF1 404 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 F8W810 466 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 GPR182O15218 404 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 KCNQ3O43525 872 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SRGAP2O75044 1071 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RTN2O75298 545 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 NPTXRO95502 500 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CARSP49589 748 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PTPN12Q05209 780 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TMED1Q13445 227 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CNGA2Q16280 664 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 KIZQ2M2Z5 673 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SHROOM1Q2M3G4 852 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 BEND6Q5SZJ8 279 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 STYK1Q6J9G0 422 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HDDC2Q7Z4H3 204 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 KSR1Q8IVT5 923 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CLYBLQ8N0X4 340 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF655Q8N720 491 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ARMC2Q8NEN0 867 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TUBGCP3Q96CW5 907 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HEMGNQ9BXL5 484 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TDRD3Q9H7E2 651 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 GALNT8Q9NY28 637 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 WWOXQ9NZC7 414 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DNAJC5BQ9UF47 199 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CEP290O15078 2479 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CPDO75976 1380 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DISP1Q96F81 1524 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PRAMEF22A3QJZ6 481 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 F5H5T6 163 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TK2O00142 265 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CTSHP09668 335 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 EIF3EP60228 445 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 BYSLQ13895 437 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TXNRD1Q16881 649 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 HLA-DQA1Q5Y7H0 255 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CYFIP1Q7L576 1253 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 BSNDQ8WZ55 320 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RNPC3Q96LT9 517 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 AP1M1Q9BXS5 423 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 TRABDQ9H4I3 376 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ANKEF1Q9NU02 776 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 IMPAD1Q9NX62 359 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 GGA3Q9NZ52 723 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 APEX2Q9UBZ4 518 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 APPL1Q9UKG1 709 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 MINPP1Q9UNW1 487 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC195A0A1B0GUA6 201 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 IGF2BP3O00425 579 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RRM2P31350 389 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 FDFT1P37268 417 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ARSEP51690 589 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PPP2R2AP63151 447 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SF3A3Q12874 501 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 PRKAA1Q13131 559 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF177Q13360 481 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CNGA3Q16281 694 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ZNF484Q5JVG2 852 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 ATF7IP2Q5U623 682 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 IL31Q6EBC2 164 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 CCDC137Q6PK04 289 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 LUZP2Q86TE4 346 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 WDR48Q8TAF3 677 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 DIS3LQ8TF46 1054 aaKnown RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RNF25Q96BH1 459 aaPredicted RBP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 SAAL1Q96ER3 474 aa4.24□□□□□ -1.73
SCN3A-201ENST00000283254 RBM15Q96T37 977 aaKnown RBP eCLIP4.24□□□□□ -1.73
SCN3A-201ENST00000283254 APOL5Q9BWW9 433 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms