RNA–Protein interactions for RNA: ENST00000280154.11

PDCD4-201, Transcript of programmed cell death 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD4, Length 3,602 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-201ENST00000280154 PCDH10Q9P2E7 1040 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 PCDHGB6Q9Y5F9 930 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 ADAM17P78536 824 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 CEBPZQ03701 1054 aaKnown RBP10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SUZ12Q15022 739 aaKnown RBP10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SETMARQ53H47 684 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-201ENST00000280154 RESP18Q5W5W9 173 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 OTOP3Q7RTS5 596 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 ANKRD13CQ8N6S4 541 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 HERVK_113Q902F9 699 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SMC6Q96SB8 1091 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 SCAND2PQ9GZW5 306 aaPredicted RBP10.02□□□□□ -0.81
PDCD4-201ENST00000280154 VTA1Q9NP79 307 aa10.02□□□□□ -0.81
PDCD4-201ENST00000280154 DOCK3Q8IZD9 2030 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 FAM86B1E9PN63 330 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 STBD1O95210 358 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CHRM5P08912 532 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 FAM86B2P0C5J1 330 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CYP2C8P10632 490 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 HOXD12P35452 270 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 HAUS3Q68CZ6 603 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 RNF207Q6ZRF8 634 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PLEKHH3Q7Z736 793 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 NELFCDQ8IXH7 590 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PPFIBP2Q8ND30 876 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 SPATA20Q8TB22 786 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 AFAP1L1Q8TED9 768 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 LEO1Q8WVC0 666 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 RNF34Q969K3 372 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 KIAA1143Q96AT1 154 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CCDC127Q96BQ5 260 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CEP44Q9C0F1 390 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 MTRRQ9UBK8 725 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 EIF4E1BA6NMX2 242 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PRPF6O94906 941 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CYP17A1P05093 508 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ITGB5P18084 799 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 NLRP5P59047 1200 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 NOP14P78316 857 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 NFKB2Q00653 900 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 STRN3Q13033 797 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PLD1Q13393 1074 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 NAA30Q147X3 362 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TMEM119Q4V9L6 283 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 SH3RF1Q7Z6J0 888 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 SPATA2LQ8IUW3 424 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CPLX3Q8WVH0 158 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 USP28Q96RU2 1077 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 AGO4Q9HCK5 861 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TUBA8Q9NY65 449 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CAPN11Q9UMQ6 739 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PCDHB3Q9Y5E6 796 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 RALGAPA2Q2PPJ7 1873 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 FAM205CA6NFA0 338 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 RRP8O43159 456 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PSMA3P25788 255 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 RPL13P26373 211 aaKnown RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 KLC1Q07866 573 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CUL3Q13618 768 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TAF5Q15542 800 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 CLVS2Q5SYC1 327 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ADALQ6DHV7 355 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TBCKQ8TEA7 893 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ABHD8Q96I13 439 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 MAML3Q96JK9 1138 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 IFT74Q96LB3 600 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 PRICKLE1Q96MT3 831 aaPredicted RBP10.01□□□□□ -0.81
PDCD4-201ENST00000280154 GBP3Q9H0R5 595 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 SNX25Q9H3E2 840 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TMEM260Q9NX78 707 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 FAM8A1Q9UBU6 413 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 SEPT3Q9UH03 358 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 ZKSCAN5Q9Y2L8 839 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 LTBP2Q14767 1821 aa10.01□□□□□ -0.81
PDCD4-201ENST00000280154 TISP43B9A030 160 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 B9A039 149 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 CASQ2O14958 399 aaPredicted RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 AOC2O75106 756 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 SMIM24O75264 130 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 TXLNAP40222 546 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 IL1RL1Q01638 556 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 ANKRD20A8PQ5CZ79 823 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 ANKRD20A2Q5SQ80 823 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 ANKRD20A3Q5VUR7 823 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 SPERTQ8NA61 448 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 TRIM63Q969Q1 353 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 PMEPA1Q969W9 287 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 PGBD1Q96JS3 809 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 CNTN3Q9P232 1028 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 CUTAO60888 179 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 FBXO21O94952 628 aa10□□□□□ -0.81
PDCD4-201ENST00000280154 SNAI1O95863 264 aaPredicted RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 ZNF865P0CJ78 1059 aaPredicted RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 CST5P28325 142 aaPredicted RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 HNRNPH1P31943 449 aaKnown RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 LONP1P36776 959 aaKnown RBP10□□□□□ -0.81
PDCD4-201ENST00000280154 RAD52P43351 418 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms