RNA–Protein interactions for RNA: ENST00000277575.5

USP6NL-201, Transcript of USP6 N-terminal like, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USP6NL, Length 4,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-201ENST00000277575 ANKRD20A8PQ5CZ79 823 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ANKRD20A2Q5SQ80 823 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ANKRD20A1Q5TYW2 823 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 MTHFD1LQ6UB35 978 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ACOT1Q86TX2 421 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 DDX42Q86XP3 938 aaKnown RBP eCLIP11.82□□□□□ -0.52
USP6NL-201ENST00000277575 SH3TC2Q8TF17 1288 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 CGRRF1Q99675 332 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 FUCA2Q9BTY2 467 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 CELF4Q9BZC1 486 aaKnown RBP11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ORC1Q13415 861 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 SNX17Q15036 470 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 LY6KQ17RY6 165 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 IL31Q6EBC2 164 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 REXO1L1PQ8IX06 675 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 CERS5Q8N5B7 392 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 KIAA0895Q8NCT3 520 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 TMEM169Q96HH4 297 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 TRIM54Q9BYV2 358 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 FOXP3Q9BZS1 431 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ASCC2Q9H1I8 757 aaPredicted RBP11.82□□□□□ -0.52
USP6NL-201ENST00000277575 ZFP69BQ9UJL9 534 aa11.82□□□□□ -0.52
USP6NL-201ENST00000277575 EPHB2P29323 1055 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CNTN2Q02246 1040 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 KYNUQ16719 465 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 SLC13A5Q86YT5 568 aaPredicted RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 STKLD1Q8NE28 680 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 LBHD1Q9BQE6 289 aaPredicted RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 DYRK4Q9NR20 520 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 DDIT4Q9NX09 232 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 XPO7Q9UIA9 1087 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 DUSP10Q9Y6W6 482 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 GZMAP12544 262 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CYP24A1Q07973 514 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 ANGPTL8Q6UXH0 198 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CHSY1Q86X52 802 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 OSMRQ99650 979 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 ALG13Q9NP73 1137 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 A1CFQ9NQ94 594 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PPME1Q9Y570 386 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 AGTP01019 485 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 RPSAP08865 295 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 VDRP11473 427 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 ALDH7A1P49419 539 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 LAMTOR4Q0VGL1 99 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 IMPG1Q17R60 797 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 NYAP1Q6ZVC0 841 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 NUDT18Q6ZVK8 323 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 NIPA1Q7RTP0 329 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 NLRP14Q86W24 1093 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 SH2D3CQ8N5H7 860 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PCSK9Q8NBP7 692 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PPHLN1Q8NEY8 458 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 LACRTQ9GZZ8 138 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 TSR3Q9UJK0 312 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 TRIM33Q9UPN9 1127 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CHMP2BQ9UQN3 213 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PCDHB7Q9Y5E2 793 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 ORC6Q9Y5N6 252 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 KIF3CO14782 793 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 AP1G2O75843 785 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 LUC7L3O95232 432 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 ODC1P11926 461 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PMS1P54277 932 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 MYL6P60660 151 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 SKIV2LQ15477 1246 aaKnown RBP11.81□□□□□ -0.52
USP6NL-201ENST00000277575 UGP2Q16851 508 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 MKL1Q969V6 931 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 CATSPERBQ9H7T0 1116 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 SETD4Q9NVD3 440 aa11.81□□□□□ -0.52
USP6NL-201ENST00000277575 PSMD3O43242 534 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ATP5HO75947 161 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 TM4SF1P30408 202 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 HSPA9P38646 679 aaKnown RBP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 GUCY1A3Q02108 690 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 KRT35Q92764 455 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ACSF2Q96CM8 615 aaPredicted RBP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ZSWIM1Q9BR11 485 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 VIPAS39Q9H9C1 493 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 AIPL1Q9NZN9 384 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 AFF4Q9UHB7 1163 aaKnown RBP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 DNAJC6O75061 913 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 PTPRAP18433 802 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ALDH1A3P47895 512 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 PPATQ06203 517 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 C10orf120Q5SQS8 335 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ILDR1Q86SU0 546 aaPredicted RBP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 SNX19Q92543 992 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 SLC5A5Q92911 643 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 CYFIP2Q96F07 1278 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 DRC3Q9H069 523 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 ABHD16BQ9H3Z7 469 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 CAPN6Q9Y6Q1 641 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 GTPBP10A4D1E9 387 aaKnown RBP11.8□□□□□ -0.52
USP6NL-201ENST00000277575 M0QYT0 321 aa11.8□□□□□ -0.52
USP6NL-201ENST00000277575 EML1O00423 815 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms