RNA–Protein interactions for RNA: ENST00000277198.6

C9orf3-201, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2 BASIC

Gene C9orf3, Length 1,966 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-201ENST00000277198 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 CCHCR1Q8TD31 782 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 ARHGEF2Q92974 986 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 DDX27Q96GQ7 796 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 CDHR1Q96JP9 859 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 CEP170P1Q96L14 293 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 IFT74Q96LB3 600 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 POP1Q99575 1024 aaKnown RBP13.7□□□□□ -0.22
C9orf3-201ENST00000277198 TINF2Q9BSI4 451 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 ACAD9Q9H845 621 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 ARHGAP28Q9P2N2 729 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 STYXL1Q9Y6J8 313 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 MROH7Q68CQ1 1323 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 PLXNA1Q9UIW2 1896 aa13.7□□□□□ -0.22
C9orf3-201ENST00000277198 TMEM150BA6NC51 233 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SMIM23A6NLE4 172 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SNAI1O95863 264 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 VIMP08670 466 aaKnown RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 MYCLP12524 364 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 ATF2P15336 505 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 RDXP35241 583 aaKnown RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 LMNB2Q03252 620 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 KLF1Q13351 362 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 KCTD19Q17RG1 926 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 ZACNQ401N2 412 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 TRPM8Q7Z2W7 1104 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 RHOT1Q8IXI2 618 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 IPO4Q8TEX9 1081 aaKnown RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 C1orf54Q8WWF1 131 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 JPH2Q9BR39 696 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 CCDC77Q9BR77 488 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 LGALS13Q9UHV8 139 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 NEU2Q9Y3R4 380 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 NFASCO94856 1347 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SOWAHBA6NEL2 793 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 MGRN1O60291 552 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SNX3O60493 162 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 STAM2O75886 525 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 STBD1O95210 358 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 PSAPP07602 524 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 CETN2P41208 172 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SLCO1A2P46721 670 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 GSCP56915 257 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 NSMFQ6X4W1 530 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 MON1BQ7L1V2 547 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 CCDC25Q86WR0 208 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 KATNAL2Q8IYT4 538 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 RIBC1Q8N443 379 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 BSNDQ8WZ55 320 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SH2D3AQ9BRG2 576 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 TOPORSQ9NS56 1045 aaPredicted RBP13.69□□□□□ -0.22
C9orf3-201ENST00000277198 CHST7Q9NS84 486 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SLC5A4Q9NY91 659 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 ANAPC5Q9UJX4 755 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 SCINQ9Y6U3 715 aa13.69□□□□□ -0.22
C9orf3-201ENST00000277198 O00370 1275 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 NDC80O14777 642 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 ADCY6O43306 1168 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 OAS1P00973 400 aaKnown RBP13.68□□□□□ -0.22
C9orf3-201ENST00000277198 ABHD2P08910 425 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 ZNF865P0CJ78 1059 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-201ENST00000277198 RRM1P23921 792 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 SLC8A1P32418 973 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 ITGA8P53708 1063 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 STAT4Q14765 748 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 SPRED3Q2MJR0 410 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 PHF13Q86YI8 300 aaPredicted RBP13.68□□□□□ -0.22
C9orf3-201ENST00000277198 CPNE8Q86YQ8 564 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 EXD1Q8NHP7 514 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 SCLT1Q96NL6 688 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 FNBP1Q96RU3 617 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 KIFC3Q9BVG8 833 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 ATP6V0A4Q9HBG4 840 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 GABBR1Q9UBS5 961 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 CNTN6Q9UQ52 1028 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 MCM3APO60318 1980 aa13.68□□□□□ -0.22
C9orf3-201ENST00000277198 FRMPD3Q5JV73 1810 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 TMEM120BA0PK00 339 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 CDH16O75309 829 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 PIGRP01833 764 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 C4BPAP04003 597 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 MYCNP04198 464 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 TBXAS1P24557 533 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 ADCY8P40145 1251 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 RIPK1Q13546 671 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 LONRF1Q17RB8 773 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 WLSQ5T9L3 541 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 SLFN12LQ6IEE8 588 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 DYDC1Q8WWB3 177 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 ELAC2Q9BQ52 826 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 FAM213AQ9BRX8 229 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 DDX23Q9BUQ8 820 aaKnown RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 CYP39A1Q9NYL5 469 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 FBXO40Q9UH90 709 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 USP15Q9Y4E8 981 aaPredicted RBP13.67□□□□□ -0.22
C9orf3-201ENST00000277198 LCTP09848 1927 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 LAMA3Q16787 3333 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 FAM170AA1A519 330 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 SEPT4O43236 478 aa13.67□□□□□ -0.22
C9orf3-201ENST00000277198 THAP12O43422 761 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms