RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 RASGRF1Q13972 1273 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 GK3PQ14409 553 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SPARCL1Q14515 664 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PCSK7Q16549 785 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TTC38Q5R3I4 469 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 EGFLAMQ63HQ2 1017 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 DTHD1Q6ZMT9 781 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 UBE2Q1Q7Z7E8 422 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TMPRSS6Q8IU80 811 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ULK2Q8IYT8 1036 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SLC38A6Q8IZM9 456 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PCYOX1LQ8NBM8 494 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ICA1LQ8NDH6 482 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SUN5Q8TC36 379 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF398Q8TD17 642 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF696Q9H7X3 374 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 XAB2Q9HCS7 855 aaKnown RBP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 AAASQ9NRG9 546 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TMOD2Q9NZR1 351 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PCDHA4Q9UN74 947 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ERVK-11Q9UQG0 969 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.69□□□□□ -0.86
PDGFC-201ENST00000274071 NUP188Q5SRE5 1749 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MYH11P35749 1972 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 A0A0G2JND7 137 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 SFI1A8K8P3 1242 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PODXLO00592 558 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ZBED4O75132 1171 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TNFAIP8O95379 198 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 KRT75O95678 551 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MSL3P1P0C860 447 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 KRT13P13646 458 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 RASA2Q15283 850 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TIGD2Q4W5G0 525 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 TTC23LQ6PF05 361 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 RHOT2Q8IXI1 618 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MYO1HQ8N1T3 1032 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 PPM1KQ8N3J5 372 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 EXD1Q8NHP7 514 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MTBPQ96DY7 904 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 MED30Q96HR3 178 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 UIMC1Q96RL1 719 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 RANBP9Q96S59 729 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 THTPAQ9BU02 230 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 CNGB3Q9NQW8 809 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 GPRC5DQ9NZD1 345 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 ACTL7BQ9Y614 415 aa9.69□□□□□ -0.86
PDGFC-201ENST00000274071 EMSYQ7Z589 1322 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 ITGB4P16144 1822 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 A0A1W2PRG0 241 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 H3BRJ5 948 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 DNAJA2O60884 412 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 SULT1C4O75897 302 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PARNO95453 639 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 FDFT1P37268 417 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 EPS15P42566 896 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 OVGP1Q12889 678 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 EIF2B5Q13144 721 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 RAPGEF1Q13905 1077 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 USP41Q3LFD5 358 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 CCDC62Q6P9F0 684 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 AAGABQ6PD74 315 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 MIER3Q7Z3K6 550 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 TTC7BQ86TV6 843 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 AHI1Q8N157 1196 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 RBM15BQ8NDT2 890 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PDZD8Q8NEN9 1154 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 HELQQ8TDG4 1101 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 SGF29Q96ES7 293 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 RTFDC1Q9BY42 306 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 OSBPL8Q9BZF1 889 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 UNKQ9C0B0 810 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 DISC1Q9NRI5 854 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 CRNNQ9UBG3 495 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 LGALS13Q9UHV8 139 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PLA2G4CQ9UP65 541 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 IFT52Q9Y366 437 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 AHDC1Q5TGY3 1603 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 ABCB11O95342 1321 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 CAPN8A6NHC0 703 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 A8MU76 341 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 TCEA3O75764 348 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 TTC4O95801 387 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 DDX5P17844 614 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 LIFRP42702 1097 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PTK2Q05397 1052 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PDE4DQ08499 809 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 ZNF211Q13398 564 aaPredicted RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 SUZ12Q15022 739 aaKnown RBP9.68□□□□□ -0.86
PDGFC-201ENST00000274071 MAPK6Q16659 721 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 LPCAT2Q7L5N7 544 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 POU5F2Q8N7G0 328 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 LILRB4Q8NHJ6 448 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 OTUD5Q96G74 571 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 PLIN2Q99541 437 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 DNAJC16Q9Y2G8 782 aa9.68□□□□□ -0.86
PDGFC-201ENST00000274071 CYP26A1O43174 497 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 CDH16O75309 829 aa9.67□□□□□ -0.86
PDGFC-201ENST00000274071 IFIT1P09914 478 aaKnown RBP9.67□□□□□ -0.86
PDGFC-201ENST00000274071 KRT2P35908 639 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms