RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PWWP2AQ96N64 755 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ACO2Q99798 780 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 PTPN18Q99952 460 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TMEM109Q9BVC6 243 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 PARVAQ9NVD7 372 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TCF4P15884 667 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 IVDP26440 423 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 MMP13P45452 471 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TFAMQ00059 246 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 AUHQ13825 339 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ERMARDQ5T6L9 678 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 KAZNQ674X7 775 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 CDCA2Q69YH5 1023 aaPredicted RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 CTU1Q7Z7A3 348 aaKnown RBP13.67□□□□□ -0.22
CPSF6-201ENST00000266679 CROCCP2Q86T23 111 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 PRUNE1Q86TP1 453 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ATL2Q8NHH9 583 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 TRAPPC12Q8WVT3 735 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 NIF3L1Q9GZT8 377 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 IP6K2Q9UHH9 426 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 ANAPC5Q9UJX4 755 aa13.67□□□□□ -0.22
CPSF6-201ENST00000266679 NOP56O00567 594 aaKnown RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 OGTO15294 1046 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CNMDO75829 334 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CPP00450 1065 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 KRT1P04264 644 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 GJB1P08034 283 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 DRD4P21917 467 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 OSTNP61366 133 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 TRPC3Q13507 836 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 MAPK6Q16659 721 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 TMEM132AQ24JP5 1023 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ATP13A4Q4VNC1 1196 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 DNAJC24Q6P3W2 148 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF365Q70YC5 407 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CPLX4Q7Z7G2 160 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 C3orf20Q8ND61 904 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 EXD1Q8NHP7 514 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ATXN2LQ8WWM7 1075 aaKnown RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 SEC16BQ96JE7 1060 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 MCEEQ96PE7 176 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 GPR20Q99678 358 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 STMN4Q9H169 189 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CISHQ9NSE2 258 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 C5orf60A6NFR6 353 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 WEE2P0C1S8 567 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 KRT10P13645 584 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 MMP8P22894 467 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 AP3M2P53677 418 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 PDE4CQ08493 712 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF252P-AS1Q0IIN9 211 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CRHR2Q13324 411 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 HSDL1Q3SXM5 330 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF568Q3ZCX4 644 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 IZUMO3Q5VZ72 239 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 PPP1R2P3Q6NXS1 205 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 RHPN2Q8IUC4 686 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 FBXO16Q8IX29 292 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 THNSL1Q8IYQ7 743 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 TCP11Q8WWU5 503 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 BBXQ8WY36 941 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 CENPTQ96BT3 561 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ZBTB10Q96DT7 871 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 TRAIPQ9BWF2 469 aa13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ASCC2Q9H1I8 757 aaPredicted RBP13.66□□□□□ -0.22
CPSF6-201ENST00000266679 ZBTB42B2RXF5 422 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 ABLIM1O14639 778 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 IRF6O14896 467 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CALB1P05937 261 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 TMEM191BP0C7N4 346 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 TGFB3P10600 412 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 ATF7P17544 494 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-201ENST00000266679 SLC20A2Q08357 652 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 PLCB4Q15147 1175 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CCNG2Q16589 344 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 DUOXA2Q1HG44 320 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CYP4A22Q5TCH4 519 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 GPAT2Q6NUI2 795 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 GSTA5Q7RTV2 222 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CACNA2D3Q8IZS8 1091 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 IPO4Q8TEX9 1081 aaKnown RBP13.65□□□□□ -0.22
CPSF6-201ENST00000266679 BRI3BPQ8WY22 251 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 ACSF2Q96CM8 615 aaPredicted RBP13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CHMP6Q96FZ7 201 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 MS4A4AQ96JQ5 239 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 FGD4Q96M96 766 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 NLRP4Q96MN2 994 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 HOMER3Q9NSC5 361 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 INTS9Q9NV88 658 aaKnown RBP13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CPSF3Q9UKF6 684 aaKnown RBP13.65□□□□□ -0.22
CPSF6-201ENST00000266679 NEU2Q9Y3R4 380 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 CAPN7Q9Y6W3 813 aa13.65□□□□□ -0.22
CPSF6-201ENST00000266679 TMEM191CA6NGB0 347 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 B4GALT5O43286 388 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CAP1Q01518 475 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 OGDHQ02218 1023 aa13.64□□□□□ -0.23
CPSF6-201ENST00000266679 CAV1Q03135 178 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.8 ms