RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 GTPBP10A4D1E9 387 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 ANKRD65E5RJM6 399 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 GYG2O15488 501 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 LUC7L3O95232 432 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 AGTP01019 485 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 CARSP49589 748 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 MYL6P60660 151 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 BOLA3Q53S33 107 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 CATSPERGQ6ZRH7 1159 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 ACAD11Q709F0 780 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 CDC26Q8NHZ8 85 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 TRPM4Q8TD43 1214 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 AP3B1O00203 1094 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 NPM3O75607 178 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 GZMAP12544 262 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 ACO1P21399 889 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 PAN2Q504Q3 1202 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 NT5DC1Q5TFE4 455 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 PDZD8Q8NEN9 1154 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 ASAP3Q8TDY4 903 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 SARS2Q9NP81 518 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 TRAF3IP3Q9Y228 551 aa16.16■□□□□ 0.18
TIMP3-201ENST00000266085 FARP1Q9Y4F1 1045 aaPredicted RBP16.16■□□□□ 0.18
TIMP3-201ENST00000266085 E5RI56 91 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 NKRFO15226 690 aaKnown RBP eCLIP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 CXCL8P10145 99 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 MDM2Q00987 491 aaPredicted RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 NSUN2Q08J23 767 aaKnown RBP eCLIP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 NLRP14Q86W24 1093 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 VTA1Q9NP79 307 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 GNGT2O14610 69 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 AP5Z1O43299 807 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SPAG7O75391 227 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 PPP1R37O75864 691 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 ATP5HO75947 161 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 NCAM1P13591 858 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 DDX50Q9BQ39 737 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 CELF4Q9BZC1 486 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 TRABDQ9H4I3 376 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 ABI2Q9NYB9 513 aaPredicted RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 PAK5Q9P286 719 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SHPRHQ149N8 1683 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SPECC1L-ADORA2AF8WAN1 911 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 TBC1D12O60347 775 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 ARFIP2P53365 341 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 KIF19Q2TAC6 998 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 DDX42Q86XP3 938 aaKnown RBP eCLIP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 PABPC5Q96DU9 382 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 UPF3AQ9H1J1 476 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 CAPN6Q9Y6Q1 641 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 UBA6A0AVT1 1052 aaPredicted RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 TFRCP02786 760 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 GRIK4Q16099 956 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 MOB2Q70IA6 237 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 RASSF3Q86WH2 238 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SLC13A5Q86YT5 568 aaPredicted RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 ARRDC4Q8NCT1 418 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 USP33Q8TEY7 942 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SPDL1Q96EA4 605 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 BTBD6Q96KE9 485 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 DUSP9Q99956 384 aaKnown RBP16.15■□□□□ 0.18
TIMP3-201ENST00000266085 ARHGAP20Q9P2F6 1191 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 KIAA1257Q9ULG3 409 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 SLIT3O75094 1523 aa16.15■□□□□ 0.18
TIMP3-201ENST00000266085 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.18
TIMP3-201ENST00000266085 EEF2KO00418 725 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 HAUS5O94927 633 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 KITP10721 976 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 SKIP12755 728 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 HSPA9P38646 679 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 SPIRE2Q8WWL2 714 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 HAS1Q92839 578 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 PACSIN1Q9BY11 444 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ADAM33Q9BZ11 813 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ZFP69BQ9UJL9 534 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 F8VZ95 297 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ALDH1A1P00352 501 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 GUCY1A3Q02108 690 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 PDK1Q15118 436 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 E2F4Q16254 413 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CNPY4Q8N129 248 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 SH2D3CQ8N5H7 860 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ZSWIM1Q9BR11 485 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 L2HGDHQ9H9P8 463 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 EHD2Q9NZN4 543 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 PCDHB7Q9Y5E2 793 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CENPCQ03188 943 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 MTM1Q13496 603 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ATPAF2Q8N5M1 289 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ULK4Q96C45 1275 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 SLITRK1Q96PX8 696 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CISHQ9NSE2 258 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 CYP39A1Q9NYL5 469 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 MOSPD1Q9UJG1 213 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ZC3H4Q9UPT8 1303 aaKnown RBP16.14■□□□□ 0.17
TIMP3-201ENST00000266085 SMAPO00193 183 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 DIAPH2O60879 1101 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 ATXN8OSP0DMR3 200 aa16.14■□□□□ 0.17
TIMP3-201ENST00000266085 MAPTP10636 758 aaKnown RBP16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms