RNA–Protein interactions for RNA: ENST00000266079.4

PRPF6-201, Transcript of pre-mRNA processing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF6, Length 3,044 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF6-201ENST00000266079 EEF1DP3Q658K8 133 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 THNSL1Q8IYQ7 743 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 CCDC26Q8TAB7 109 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ELMO3Q96BJ8 720 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 SENP6Q9GZR1 1112 aaPredicted RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ARMCX3Q9UH62 379 aaPredicted RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ADAMTS1Q9UHI8 967 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 FRMD4BQ9Y2L6 1034 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 MBLAC1A4D2B0 266 aaPredicted RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 KPNA6O60684 536 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 THPOP40225 353 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 POLR2FP61218 127 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 NCALDP61601 193 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 MBTD1Q05BQ5 628 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 SF3A3Q12874 501 aaKnown RBP eCLIP13.42□□□□□ -0.266e-8■■■■□ 24.1
PRPF6-201ENST00000266079 PRPF4BQ13523 1007 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 BLMHQ13867 455 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 POP1Q99575 1024 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 SELENOSQ9BQE4 189 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ST6GALNAC4Q9H4F1 302 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ABCF3Q9NUQ8 709 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 RNF19AQ9NV58 838 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 CEP290O15078 2479 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 LAMA3Q16787 3333 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ENO4A6NNW6 628 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 GNAT1P11488 350 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 CDC25CP30307 473 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 CTCFP49711 727 aaPredicted RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 RWDD2BP57060 319 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 DLG4P78352 724 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 NFX1Q12986 1120 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ALCAMQ13740 583 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PPP4R3CPQ6ZMV5 832 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ARRDC4Q8NCT1 418 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 DIS3LQ8TF46 1054 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 MSTO1Q9BUK6 570 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 LSM14BQ9BX40 385 aaKnown RBP13.42□□□□□ -0.26
PRPF6-201ENST00000266079 TXLNGYQ9BZA5 131 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ADAM7Q9H2U9 754 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ETAA1Q9NY74 926 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 ATP8A1Q9Y2Q0 1164 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 PPME1Q9Y570 386 aa13.42□□□□□ -0.26
PRPF6-201ENST00000266079 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.42□□□□□ -0.266e-6■■■□□ 15.1
PRPF6-201ENST00000266079 SCN10AQ9Y5Y9 1956 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 CLDN3O15551 220 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 TTI1O43156 1089 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 UBOX5O94941 541 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 ADRB2P07550 413 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 RARAP10276 462 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 DLATP10515 647 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 ITGA4P13612 1032 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 KLHL30Q0D2K2 578 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 IFI16Q16666 785 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 XXYLT1Q8NBI6 393 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 SPDYE1Q8NFV5 336 aaPredicted RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 PGM2Q96G03 612 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 DPH5Q9H2P9 285 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 CCDC134Q9H6E4 229 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 PAK6Q9NQU5 681 aaPredicted RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 SNUPNO95149 360 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 PSMC2P35998 433 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 TNFSF9P41273 254 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 EFNA5P52803 228 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 RAPGEF1Q13905 1077 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 CATSPER4Q7RTX7 472 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 LRRC57Q8N9N7 239 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 U2AF1L4Q8WU68 220 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 MRPL4Q9BYD3 311 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 NSRP1Q9H0G5 558 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 GOLPH3Q9H4A6 298 aa13.41□□□□□ -0.26
PRPF6-201ENST00000266079 TOPORSQ9NS56 1045 aaPredicted RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 UTP11Q9Y3A2 253 aaKnown RBP13.41□□□□□ -0.26
PRPF6-201ENST00000266079 UBE4BO95155 1302 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 A6NHS1 94 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 PQBP1O60828 265 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 GPR32O75388 356 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 ARID5AQ03989 594 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 RBBP5Q15291 538 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 SNRNP35Q16560 246 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 ZNF568Q3ZCX4 644 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 C10orf76Q5T2E6 689 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 FBXO46Q6PJ61 603 aaPredicted RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 RASGEF1CQ8N431 466 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 SLC17A8Q8NDX2 589 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 CEP63Q96MT8 703 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 CCDC113Q9H0I3 377 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 INTS9Q9NV88 658 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 AIPL1Q9NZN9 384 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 H0YCG3 227 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 VIMP08670 466 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 NUDT17P0C025 328 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 ARF4P18085 180 aaPredicted RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 ATF7IP2Q5U623 682 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 TMEM192Q8IY95 271 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 FMO2Q99518 471 aa13.4□□□□□ -0.26
PRPF6-201ENST00000266079 CELF4Q9BZC1 486 aaKnown RBP13.4□□□□□ -0.26
PRPF6-201ENST00000266079 C2orf40Q9H1Z8 148 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms