RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 IZUMO3Q5VZ72 239 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ZNF473Q8WTR7 871 aaKnown RBP17.2■□□□□ 0.34
CTCF-201ENST00000264010 MCEEQ96PE7 176 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ERVK-5Q9HDB9 667 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 GGT7Q9UJ14 662 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ADGRA3Q8IWK6 1321 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 STX2P32856 288 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ARL2P36404 184 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 SEC24CP53992 1094 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 TMED1Q13445 227 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 PIGHQ14442 188 aaPredicted RBP17.2■□□□□ 0.34
CTCF-201ENST00000264010 SLC39A4Q6P5W5 647 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 C1orf131Q8NDD1 294 aaKnown RBP17.2■□□□□ 0.34
CTCF-201ENST00000264010 ZNF606Q8WXB4 792 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ATG4AQ8WYN0 398 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 CFAP57Q96MR6 1250 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 MROH8Q9H579 483 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 ZWILCHQ9H900 591 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 WHRNQ9P202 907 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 HESX1Q9UBX0 185 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 MYH11P35749 1972 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 PPFIA2O75334 1257 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 FARP2O94887 1054 aaPredicted RBP17.2■□□□□ 0.34
CTCF-201ENST00000264010 YARSP54577 528 aaKnown RBP17.2■□□□□ 0.34
CTCF-201ENST00000264010 DYNLT1P63172 113 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 RFX6Q8HWS3 928 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 NENFQ9UMX5 172 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 NR2E1Q9Y466 385 aa17.2■□□□□ 0.34
CTCF-201ENST00000264010 MAGEB2O15479 319 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 C4BPAP04003 597 aaKnown RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 KRT7P08729 469 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 TRIM50Q86XT4 487 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 FBXO16Q8IX29 292 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 PARP9Q8IXQ6 854 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 CCDC197Q8NCU1 140 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 SPDYE1Q8NFV5 336 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 KLHL11Q9NVR0 708 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 SLC5A4Q9NY91 659 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 LSM8O95777 96 aaKnown RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 COG7P83436 770 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 ADCY1Q08828 1119 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 ARL10Q8N8L6 244 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 REPS2Q8NFH8 660 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 HAUS1Q96CS2 278 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 CISHQ9NSE2 258 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 KCTD6Q8NC69 237 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 ROPN1BQ9BZX4 212 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 ZNF518BQ9C0D4 1074 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 NEUROG2Q9H2A3 272 aa17.19■□□□□ 0.34
CTCF-201ENST00000264010 ROPN1Q9HAT0 212 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 GREB1LQ9C091 1923 aaPredicted RBP17.19■□□□□ 0.34
CTCF-201ENST00000264010 IRF6O14896 467 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 KRT3P12035 628 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 CLCN3P51790 818 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 KRT81Q14533 505 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 KYAT1Q16773 422 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SH3D19Q5HYK7 790 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SLC30A9Q6PML9 568 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 CDR2LQ86X02 465 aaPredicted RBP17.18■□□□□ 0.34
CTCF-201ENST00000264010 TTC13Q8NBP0 860 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 OR5B17Q8NGF7 314 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 EXD1Q8NHP7 514 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 KLHL29Q96CT2 875 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 ITGA8P53708 1063 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 NFX1Q12986 1120 aaKnown RBP17.18■□□□□ 0.34
CTCF-201ENST00000264010 SNAPC2Q13487 334 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 TMEM174Q8WUU8 243 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 DIAPH2O60879 1101 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 FAM107AO95990 144 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 PHBP35232 272 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 LAMC2Q13753 1193 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 OR6B2Q6IFH4 312 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SCYL2Q6P3W7 929 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 MAP7D3Q8IWC1 876 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 FERMT1Q9BQL6 677 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SYT11Q9BT88 431 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 CALN1Q9BXU9 219 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SEMA4AQ9H3S1 761 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 BTBD7Q9P203 1132 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 WDR35Q9P2L0 1181 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 NUB1Q9Y5A7 615 aa17.18■□□□□ 0.34
CTCF-201ENST00000264010 SHOX2O60902 331 aaPredicted RBP17.17■□□□□ 0.34
CTCF-201ENST00000264010 LGR5O75473 907 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 RGS20O76081 388 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 GH1P01241 217 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 FLT3P36888 993 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 TCEAL1Q15170 157 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 DCAF12L1Q5VU92 463 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 CAPN12Q6ZSI9 719 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 ARMCX6Q7L4S7 300 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 SPON1Q9HCB6 807 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 SAYSD1Q9NPB0 183 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 SNCAIPQ9Y6H5 919 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 FSCN2O14926 492 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 RFC1P35251 1148 aaPredicted RBP17.17■□□□□ 0.34
CTCF-201ENST00000264010 ERFP50548 548 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 SP2Q02086 613 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 STMN2Q93045 179 aa17.17■□□□□ 0.34
CTCF-201ENST00000264010 CHMP6Q96FZ7 201 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms