RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 CBWD2Q8IUF1 395 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 SCFD1Q8WVM8 642 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 CHAMP1Q96JM3 812 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 FAM84AQ96KN4 292 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 KXD1Q9BQD3 176 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 SLC39A2Q9NP94 309 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 INTS13Q9NVM9 706 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 ITGA11Q9UKX5 1188 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 CA14Q9ULX7 337 aa17.33■□□□□ 0.36
USE1-201ENST00000263897 A0A1B0GVL5 298 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 STK25O00506 426 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 NRG2O14511 850 aaPredicted RBP17.32■□□□□ 0.36
USE1-201ENST00000263897 ACTN4O43707 911 aaKnown RBP17.32■□□□□ 0.36
USE1-201ENST00000263897 MOSPD3O75425 235 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 ECI2O75521 394 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 MYL4P12829 197 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 RBP5P82980 135 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 SLC39A12Q504Y0 691 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 TANGO2Q6ICL3 276 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 LRRTM3Q86VH5 581 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 NELFCDQ8IXH7 590 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 GRAMD1CQ8IYS0 662 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 LRRC52Q8N7C0 313 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 PAGE5Q96GU1 130 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 LRRC3Q9BY71 257 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 PLA2G2FQ9BZM2 168 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 IRF2BPLQ9H1B7 796 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 DNAJC25Q9H1X3 360 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 ASAH2Q9NR71 780 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 AGPAT3Q9NRZ7 376 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 USP25Q9UHP3 1055 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 SIX4Q9UIU6 781 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 ASB3Q9Y575 518 aa17.32■□□□□ 0.36
USE1-201ENST00000263897 TSC2P49815 1807 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 UBE4BO95155 1302 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 CLIC2O15247 247 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 KLRC4O43908 158 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 HUS1O60921 280 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 KRT19P08727 400 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 PFKFB1P16118 471 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 TUFMP49411 452 aaKnown RBP17.31■□□□□ 0.36
USE1-201ENST00000263897 SMARCB1Q12824 385 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 BMT2Q1RMZ1 405 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 FAM78AQ5JUQ0 283 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 PHLDB3Q6NSJ2 640 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 DNAJB7Q7Z6W7 309 aaPredicted RBP17.31■□□□□ 0.36
USE1-201ENST00000263897 TTC9BQ8N6N2 239 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 RDH13Q8NBN7 331 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 ELSPBP1Q96BH3 223 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 ANKRD36BP1Q96IX9 119 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 ZSWIM3Q96MP5 696 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 MTMR12Q9C0I1 747 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 ARHGEF3Q9NR81 526 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 GDAP2Q9NXN4 497 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 HPSEQ9Y251 543 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
USE1-201ENST00000263897 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 GJA1P17302 382 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 STARD6P59095 220 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 BFSP1Q12934 665 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 KNOP1Q1ED39 458 aaKnown RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 SLC44A4Q53GD3 710 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 LMBRD2Q68DH5 695 aaPredicted RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 HS2ST1Q7LGA3 356 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 ALYREFQ86V81 257 aaKnown RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 DCP1BQ8IZD4 617 aaKnown RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 TMEM86AQ8N2M4 240 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 PDCL2Q8N4E4 241 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 XXYLT1Q8NBI6 393 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 OR5B17Q8NGF7 314 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 SHKBP1Q8TBC3 707 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 C2orf15Q8WU43 125 aaKnown RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 SHDQ96IW2 340 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 ASB16Q96NS5 453 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 GPR88Q9GZN0 384 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 SCAND2PQ9GZW5 306 aaPredicted RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 TBC1D17Q9HA65 648 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 ZFP14Q9HCL3 533 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 CGNQ9P2M7 1197 aaKnown RBP17.3■□□□□ 0.36
USE1-201ENST00000263897 L1RE1Q9UN81 338 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 WDFY4Q6ZS81 3184 aa17.3■□□□□ 0.36
USE1-201ENST00000263897 FAM237AA0A1B0GTK4 181 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 H0Y858 1186 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 SOAT2O75908 522 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 TNNC2P02585 160 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 RFX1P22670 979 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 FCARP24071 287 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 CYP2J2P51589 502 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 CDR1P51861 262 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 PFKPQ01813 784 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 MYO1EQ12965 1108 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 PSMD2Q13200 908 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 SNW1Q13573 536 aaKnown RBP17.29■□□□□ 0.36
USE1-201ENST00000263897 TEAD2Q15562 447 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 SNRNP35Q16560 246 aaKnown RBP17.29■□□□□ 0.36
USE1-201ENST00000263897 ITIH5Q86UX2 942 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 TMC8Q8IU68 726 aa17.29■□□□□ 0.36
USE1-201ENST00000263897 WDR49Q8IV35 697 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms