RNA–Protein interactions for RNA: ENST00000263598.6

LCN1-201, Transcript of lipocalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCN1, Length 776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1-201ENST00000263598 SYT2Q8N9I0 419 aaPredicted RBP9.72□□□□□ -0.85
LCN1-201ENST00000263598 GAB3Q8WWW8 586 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 LRRC3BQ96PB8 259 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 SEPT5Q99719 369 aaPredicted RBP9.72□□□□□ -0.85
LCN1-201ENST00000263598 MKNK1Q9BUB5 465 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 ARRDC1-AS1Q9H2J1 176 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 TASP1Q9H6P5 420 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 RPF1Q9H9Y2 349 aaKnown RBP9.72□□□□□ -0.85
LCN1-201ENST00000263598 LARSQ9P2J5 1176 aaKnown RBP9.72□□□□□ -0.85
LCN1-201ENST00000263598 ZMYM5Q9UJ78 669 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 SLC8A2Q9UPR5 921 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 PCDHB6Q9Y5E3 794 aa9.72□□□□□ -0.85
LCN1-201ENST00000263598 CCDC163A0A0D9SF12 145 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 LACTBL1A8MY62 500 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 EXTL3O43909 919 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 RPP40O75818 363 aaKnown RBP9.71□□□□□ -0.86
LCN1-201ENST00000263598 SOAT2O75908 522 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 ZNF806P0C7X5 589 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 U2AF2P26368 475 aaKnown RBP eCLIP9.71□□□□□ -0.86
LCN1-201ENST00000263598 TNFSF9P41273 254 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 TOB1P50616 345 aaPredicted RBP9.71□□□□□ -0.86
LCN1-201ENST00000263598 LILRA4P59901 499 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 AMPD2Q01433 879 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 TNK2Q07912 1038 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 MGAT5BQ3V5L5 792 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 SPATA1Q5VX52 437 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 METTL23Q86XA0 190 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 CD302Q8IX05 232 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 EXOC4Q96A65 974 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 FAM212AQ96EL1 285 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 CDK5RAP3Q96JB5 506 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 SENP8Q96LD8 212 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 TMEM209Q96SK2 561 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 MMTAG2Q9BU76 263 aaKnown RBP9.71□□□□□ -0.86
LCN1-201ENST00000263598 HAPLN2Q9GZV7 340 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 C2orf42Q9NWW7 574 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 DSEQ9UL01 958 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 PCDHGA5Q9Y5G8 931 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 TRIP11Q15643 1979 aa9.71□□□□□ -0.86
LCN1-201ENST00000263598 HNRNPDLO14979 420 aaKnown RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 OGTO15294 1046 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 AKAP3O75969 853 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 EPN2O95208 641 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 PRAMEF12O95522 483 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 AVPR1AP37288 418 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 RAP1GAPP47736 663 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 GUCY2FP51841 1108 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 SLC12A3P55017 1021 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 NCKAP1LP55160 1127 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 CYP4F8P98187 520 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 CACNB1Q02641 598 aaPredicted RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 SMARCB1Q12824 385 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 SF3A2Q15428 464 aaKnown RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 CCDC6Q16204 474 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 ENOX2Q16206 610 aaKnown RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 IL17AQ16552 155 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 SLC39A12Q504Y0 691 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 HYIQ5T013 277 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 THEM5Q8N1Q8 247 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 TMEM130Q8N3G9 435 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 TTC9BQ8N6N2 239 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 C2orf15Q8WU43 125 aaKnown RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 ZSCAN31Q96LW9 406 aaPredicted RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 LPIN3Q9BQK8 851 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 SH2B1Q9NRF2 756 aaPredicted RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 GKN1Q9NS71 199 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 KMT2BQ9UMN6 2715 aaPredicted RBP9.7□□□□□ -0.86
LCN1-201ENST00000263598 CITO14578 2027 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 CACNA1BQ00975 2339 aa9.7□□□□□ -0.86
LCN1-201ENST00000263598 PPEF2O14830 753 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 TM4SF5O14894 197 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 CYP11A1P05108 521 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 ADRB2P07550 413 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 PLA2G4BP0C869 781 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 F5P12259 2224 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 DDX6P26196 483 aaKnown RBP eCLIP9.69□□□□□ -0.86
LCN1-201ENST00000263598 PMLP29590 882 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 ABCD1P33897 745 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 PXNP49023 591 aaPredicted RBP9.69□□□□□ -0.86
LCN1-201ENST00000263598 SHC2P98077 582 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 BFSP1Q12934 665 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 RUNX3Q13761 415 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 TMEM132DQ14C87 1099 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 TMEM196Q5HYL7 178 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 N4BP2L1Q5TBK1 243 aaPredicted RBP9.69□□□□□ -0.86
LCN1-201ENST00000263598 STPG1Q5TH74 334 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 C9orf57Q5W0N0 161 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 JADE1Q6IE81 842 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 CC2D1AQ6P1N0 951 aaPredicted RBP9.69□□□□□ -0.86
LCN1-201ENST00000263598 KBTBD6Q86V97 674 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 CMTM8Q8IZV2 173 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 CAMKK1Q8N5S9 505 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 OR10T2Q8NGX3 314 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 SPPL2BQ8TCT7 592 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 KCNN1Q92952 543 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 PLIN2Q99541 437 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 MSTO1Q9BUK6 570 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 SLC46A2Q9BY10 475 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 ZCWPW1Q9H0M4 648 aa9.69□□□□□ -0.86
LCN1-201ENST00000263598 SMG9Q9H0W8 520 aaKnown RBP9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms