RNA–Protein interactions for RNA: ENST00000262676.9

TTC39A-202, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 2 BASIC

Gene TTC39A, Length 6,287 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-202ENST00000262676 SMNDC1O75940 238 aaKnown RBP eCLIP13.43□□□□□ -0.26
TTC39A-202ENST00000262676 NTSR2O95665 410 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CAPN1P07384 714 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 RESP18Q5W5W9 173 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 ERP27Q96DN0 273 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 KIF12Q96FN5 646 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 SEC16BQ96JE7 1060 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 KCNK16Q96T55 309 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 KATNAL1Q9BW62 490 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CD274Q9NZQ7 290 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 POLLQ9UGP5 575 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 USP15Q9Y4E8 981 aaPredicted RBP13.43□□□□□ -0.26
TTC39A-202ENST00000262676 GLI2P10070 1586 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 LARGE1O95461 756 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 RAG1P15918 1043 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 ATP12AP54707 1039 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 DRAP1Q14919 205 aaPredicted RBP13.43□□□□□ -0.26
TTC39A-202ENST00000262676 MEI1Q5TIA1 1274 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 ZNF34Q8IZ26 560 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 SCFD1Q8WVM8 642 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 TADA1Q96BN2 335 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CMTM5Q96DZ9 223 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 PITPNM2Q9BZ72 1349 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CNTNAP4Q9C0A0 1308 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 PNPLA6Q8IY17 1366 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 ALBP02768 609 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CCND1P24385 295 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 CYB5R4Q7L1T6 521 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 TBC1D19Q8N5T2 526 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 USP33Q8TEY7 942 aa13.43□□□□□ -0.26
TTC39A-202ENST00000262676 B2RBV5 119 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 PRPF3O43395 683 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 MYBL1P10243 752 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 C4BPBP20851 252 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 PRCPP42785 496 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 ST8SIA6P61647 398 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 GPR141Q7Z602 305 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 LCMT1Q9UIC8 334 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 PKP3Q9Y446 797 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 ARIH1Q9Y4X5 557 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 HMBSP08397 361 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 MYL2P10916 166 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 RHOT1Q8IXI2 618 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 C10orf53Q8N6V4 93 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 AGBL3Q8NEM8 1001 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 SEPT5Q99719 369 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 SMARCAD1Q9H4L7 1026 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 MRPL39Q9NYK5 338 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 ANO9A1A5B4 782 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 DNALI1O14645 258 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 PRR29P0C7W0 189 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 TRIM49P0CI25 452 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 TRIM49CP0CI26 452 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 GRIK1P39086 918 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 STAT4Q14765 748 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 INTS5Q6P9B9 1019 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 POTEAQ6S8J7 498 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 DGKHQ86XP1 1220 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 JPH1Q9HDC5 661 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 STARD7Q9NQZ5 370 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 MAP3K20Q9NYL2 800 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 MKRN4PQ13434 485 aaPredicted RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 USP10Q14694 798 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 UNC13DQ70J99 1090 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 CDH24Q86UP0 819 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 CHSY1Q86X52 802 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 NSUN4Q96CB9 384 aaKnown RBP13.42□□□□□ -0.26
TTC39A-202ENST00000262676 C19orf60Q96EN9 201 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 WNK4Q96J92 1243 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 CCT8L2Q96SF2 557 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 LRRC1Q9BTT6 524 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 CD248Q9HCU0 757 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 TBC1D22BQ9NU19 505 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 NDUFB10O96000 172 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 CYBBP04839 570 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 VAMP7P51809 220 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 P3H1Q32P28 736 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 PLEKHH3Q7Z736 793 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 STAP1Q9ULZ2 295 aa13.42□□□□□ -0.26
TTC39A-202ENST00000262676 hCG_1984214I3L0E3 225 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ZBTB39O15060 712 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ALDH1A1P00352 501 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 HIST1H2AGP0C0S8 130 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 MLNP12872 115 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 HIST1H2ADP20671 130 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 CTCFP49711 727 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ACTR2P61160 394 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 KRT76Q01546 638 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 SHROOM1Q2M3G4 852 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 IER5Q5VY09 327 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 E4F1Q66K89 784 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 C11orf88Q6PI97 169 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 ZNF713Q8N859 430 aaPredicted RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 PCYOX1LQ8NBM8 494 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 HIST1H2AHQ96KK5 128 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 CALR3Q96L12 384 aaKnown RBP13.41□□□□□ -0.26
TTC39A-202ENST00000262676 HIST1H2AJQ99878 128 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 H2AFJQ9BTM1 129 aa13.41□□□□□ -0.26
TTC39A-202ENST00000262676 FAM217BQ9NTX9 383 aaPredicted RBP13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms